Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AAO53782.1 | AAO53884.1 | PSPTO_0236 | PSPTO_0339 | EAL domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00563. | GGDEF domain protein; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01690. | 0.807 |
| AAO53782.1 | AAO54803.1 | PSPTO_0236 | PSPTO_1278 | EAL domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00563. | Sensory box protein/response regulator; See PMID:20190049 for expression data. | 0.565 |
| AAO53782.1 | AAO57664.1 | PSPTO_0236 | PSPTO_4208 | EAL domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00563. | HAMP domain/GGDEF domain/EAL domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00672. | 0.436 |
| AAO53782.1 | AAO57991.1 | PSPTO_0236 | PSPTO_4543 | EAL domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00563. | GAF domain/GGDEF domain/EAL domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00990. | 0.500 |
| AAO53782.1 | AAO58442.1 | PSPTO_0236 | PSPTO_5014 | EAL domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00563. | Response regulator/sensory box/GGDEF domain/EAL domain protein; See PMID:20190049 for expression data. | 0.534 |
| AAO53883.1 | AAO53884.1 | PSPTO_0338 | PSPTO_0339 | N-acetylmuramoyl-L-alanine amidase, family 2; Similar to SP:P25262, SP:P25266, and PID:43471; identified by sequence similarity; putative. | GGDEF domain protein; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01690. | 0.583 |
| AAO53883.1 | AAO53885.1 | PSPTO_0338 | PSPTO_0340 | N-acetylmuramoyl-L-alanine amidase, family 2; Similar to SP:P25262, SP:P25266, and PID:43471; identified by sequence similarity; putative. | Endonuclease/exonuclease/phosphatase family protein; See PMID:20190049 for expression data; similar to GP:9106456; identified by sequence similarity; putative. | 0.583 |
| AAO53883.1 | AAO53887.1 | PSPTO_0338 | PSPTO_0342 | N-acetylmuramoyl-L-alanine amidase, family 2; Similar to SP:P25262, SP:P25266, and PID:43471; identified by sequence similarity; putative. | Protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | 0.533 |
| AAO53883.1 | dsbA | PSPTO_0338 | PSPTO_0341 | N-acetylmuramoyl-L-alanine amidase, family 2; Similar to SP:P25262, SP:P25266, and PID:43471; identified by sequence similarity; putative. | Thiol:disulfide interchange protein DsbA; Involved in disulfide-bond formation. Acts by transferring its disulfide bond to other proteins (By similarity); Belongs to the thioredoxin family. DsbA subfamily. | 0.583 |
| AAO53884.1 | AAO53782.1 | PSPTO_0339 | PSPTO_0236 | GGDEF domain protein; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01690. | EAL domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00563. | 0.807 |
| AAO53884.1 | AAO53883.1 | PSPTO_0339 | PSPTO_0338 | GGDEF domain protein; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01690. | N-acetylmuramoyl-L-alanine amidase, family 2; Similar to SP:P25262, SP:P25266, and PID:43471; identified by sequence similarity; putative. | 0.583 |
| AAO53884.1 | AAO53885.1 | PSPTO_0339 | PSPTO_0340 | GGDEF domain protein; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01690. | Endonuclease/exonuclease/phosphatase family protein; See PMID:20190049 for expression data; similar to GP:9106456; identified by sequence similarity; putative. | 0.834 |
| AAO53884.1 | AAO53887.1 | PSPTO_0339 | PSPTO_0342 | GGDEF domain protein; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01690. | Protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | 0.773 |
| AAO53884.1 | AAO54803.1 | PSPTO_0339 | PSPTO_1278 | GGDEF domain protein; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01690. | Sensory box protein/response regulator; See PMID:20190049 for expression data. | 0.575 |
| AAO53884.1 | AAO55004.1 | PSPTO_0339 | PSPTO_1483 | GGDEF domain protein; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01690. | Response regulator/EAL domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00072. | 0.844 |
| AAO53884.1 | AAO57664.1 | PSPTO_0339 | PSPTO_4208 | GGDEF domain protein; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01690. | HAMP domain/GGDEF domain/EAL domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00672. | 0.824 |
| AAO53884.1 | AAO57991.1 | PSPTO_0339 | PSPTO_4543 | GGDEF domain protein; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01690. | GAF domain/GGDEF domain/EAL domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00990. | 0.825 |
| AAO53884.1 | AAO58442.1 | PSPTO_0339 | PSPTO_5014 | GGDEF domain protein; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01690. | Response regulator/sensory box/GGDEF domain/EAL domain protein; See PMID:20190049 for expression data. | 0.578 |
| AAO53884.1 | dsbA | PSPTO_0339 | PSPTO_0341 | GGDEF domain protein; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01690. | Thiol:disulfide interchange protein DsbA; Involved in disulfide-bond formation. Acts by transferring its disulfide bond to other proteins (By similarity); Belongs to the thioredoxin family. DsbA subfamily. | 0.795 |
| AAO53885.1 | AAO53883.1 | PSPTO_0340 | PSPTO_0338 | Endonuclease/exonuclease/phosphatase family protein; See PMID:20190049 for expression data; similar to GP:9106456; identified by sequence similarity; putative. | N-acetylmuramoyl-L-alanine amidase, family 2; Similar to SP:P25262, SP:P25266, and PID:43471; identified by sequence similarity; putative. | 0.583 |
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