STRINGSTRING
AAO53913.1 AAO53913.1 AAO55767.1 AAO55767.1 AAO54525.1 AAO54525.1 AAO57353.1 AAO57353.1 AAO55736.1 AAO55736.1 AAO58386.1 AAO58386.1 algK algK AAO58717.1 AAO58717.1 AAO58417.1 AAO58417.1 AAO56986.1 AAO56986.1 AAO58219.1 AAO58219.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAO53913.1Outer membrane porin, OprD family; Similar to GP:2645844, and SP:P32722; identified by sequence similarity; putative. (441 aa)    
Predicted Functional Partners:
AAO55767.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
     0.699
AAO54525.1
Conserved hypothetical protein.
  
     0.653
AAO57353.1
Protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
     0.642
AAO55736.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
     0.641
AAO58386.1
HAMP domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00672.
  
     0.630
algK
Alginate biosynthesis protein AlgK; May be involved in the polymerization of mannuronate to alginate.
  
     0.618
AAO58717.1
Conserved protein of unknown function; See PMID:20190049 for expression data.
  
     0.614
AAO58417.1
Conserved hypothetical protein; Identified by match to PFAM protein family HMM PF02585.
  
     0.612
AAO56986.1
Cell division inhibitor, putative; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division.
  
     0.604
AAO58219.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
     0.604
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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