Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AAO53766.1 | AAO53928.1 | PSPTO_0220 | PSPTO_0384 | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | Transcriptional regulator, ArsR family; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR00740. | 0.740 |
| AAO53766.1 | AAO54724.1 | PSPTO_0220 | PSPTO_1197 | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | Conserved protein of unknown function; Similar to GB:M60091, GB:L46359, GB:L46360, GB:L46361, GB:L46362, GB:L48713, GB:L48715, GB:L48716, SP:P07902, PID:1066737, PID:1066749, PID:1066751, PID:1066753, PID:182951, PID:306759, PID:950351, PID:950353, PID:950355, PID:950357, PID:950365, PID:950367, PID:950369, PID:950377, PID:950381, PID:950383, PID:950391, PID:950393, PID:950395, PID:950397, PID:950399, PID:950401, PID:950403, and PID:950405; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GB:M60091, GB:L46359, GB:L46360, GB:L46361, GB:L4636 [...] | 0.741 |
| AAO53766.1 | AAO56987.1 | PSPTO_0220 | PSPTO_3512 | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | 0.773 |
| AAO53766.1 | AAO58683.1 | PSPTO_0220 | PSPTO_5257 | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | Protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | 0.773 |
| AAO53766.1 | ADD52990.1 | PSPTO_0220 | PSPTO_5634 | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | Conserved protein of unknown function; PMID:20190049. | 0.765 |
| AAO53928.1 | AAO53766.1 | PSPTO_0384 | PSPTO_0220 | Transcriptional regulator, ArsR family; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR00740. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | 0.740 |
| AAO53928.1 | AAO54292.1 | PSPTO_0384 | PSPTO_0750 | Transcriptional regulator, ArsR family; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR00740. | Copper-translocating P-type ATPase; See PMID:20190049 for expression data. | 0.632 |
| AAO53928.1 | AAO54724.1 | PSPTO_0384 | PSPTO_1197 | Transcriptional regulator, ArsR family; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR00740. | Conserved protein of unknown function; Similar to GB:M60091, GB:L46359, GB:L46360, GB:L46361, GB:L46362, GB:L48713, GB:L48715, GB:L48716, SP:P07902, PID:1066737, PID:1066749, PID:1066751, PID:1066753, PID:182951, PID:306759, PID:950351, PID:950353, PID:950355, PID:950357, PID:950365, PID:950367, PID:950369, PID:950377, PID:950381, PID:950383, PID:950391, PID:950393, PID:950395, PID:950397, PID:950399, PID:950401, PID:950403, and PID:950405; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GB:M60091, GB:L46359, GB:L46360, GB:L46361, GB:L4636 [...] | 0.710 |
| AAO53928.1 | AAO56987.1 | PSPTO_0384 | PSPTO_3512 | Transcriptional regulator, ArsR family; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR00740. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | 0.736 |
| AAO53928.1 | AAO57967.1 | PSPTO_0384 | PSPTO_4519 | Transcriptional regulator, ArsR family; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR00740. | This gene is aparrently the terminal component of a non-ribosomal peptide synthetase (due to the presence of the terminal thioesterase domain) and is most likely associated with the previous gene which appears to be a initiating component. This gene contains three complete amino acid activation, thiolation and condensation domain modules and appears to be specific for glycine, an unidentified amino acid and serine according to the prediction algorithm at http://raynam.chm.jhu.edu/; nrps/index2.html. Taken together these two genes appear to direct the biosynthesis of a previously undesc [...] | 0.635 |
| AAO53928.1 | AAO58683.1 | PSPTO_0384 | PSPTO_5257 | Transcriptional regulator, ArsR family; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR00740. | Protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | 0.725 |
| AAO53928.1 | ADD52990.1 | PSPTO_0384 | PSPTO_5634 | Transcriptional regulator, ArsR family; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR00740. | Conserved protein of unknown function; PMID:20190049. | 0.752 |
| AAO53928.1 | cmaA | PSPTO_0384 | PSPTO_4709 | Transcriptional regulator, ArsR family; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR00740. | Coronamic acid synthetase CmaA; Non-ribosomal peptide synthetase with adenylation and thiolation domains; reacts with the AMP derivative of L-allo-isoleucine to produce an aminoacyl thiolester intermediate during coronamic acid biosynthesis; see PMID: 14679222; see PMID:20190049 for expression data; non-ribosomal peptide synthetase with adenylation and thiolation domains, reacts with the AMP derivative of L-allo-isoleucine to produce an aminoacyl thiolester intermediate during coronamic acid biosynthesis, see PMID: 14679222. | 0.635 |
| AAO53928.1 | metH | PSPTO_0384 | PSPTO_2732 | Transcriptional regulator, ArsR family; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR00740. | 5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.632 |
| AAO53928.1 | metK | PSPTO_0384 | PSPTO_0383 | Transcriptional regulator, ArsR family; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR00740. | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.830 |
| AAO54292.1 | AAO53928.1 | PSPTO_0750 | PSPTO_0384 | Copper-translocating P-type ATPase; See PMID:20190049 for expression data. | Transcriptional regulator, ArsR family; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR00740. | 0.632 |
| AAO54292.1 | AAO57967.1 | PSPTO_0750 | PSPTO_4519 | Copper-translocating P-type ATPase; See PMID:20190049 for expression data. | This gene is aparrently the terminal component of a non-ribosomal peptide synthetase (due to the presence of the terminal thioesterase domain) and is most likely associated with the previous gene which appears to be a initiating component. This gene contains three complete amino acid activation, thiolation and condensation domain modules and appears to be specific for glycine, an unidentified amino acid and serine according to the prediction algorithm at http://raynam.chm.jhu.edu/; nrps/index2.html. Taken together these two genes appear to direct the biosynthesis of a previously undesc [...] | 0.521 |
| AAO54292.1 | cmaA | PSPTO_0750 | PSPTO_4709 | Copper-translocating P-type ATPase; See PMID:20190049 for expression data. | Coronamic acid synthetase CmaA; Non-ribosomal peptide synthetase with adenylation and thiolation domains; reacts with the AMP derivative of L-allo-isoleucine to produce an aminoacyl thiolester intermediate during coronamic acid biosynthesis; see PMID: 14679222; see PMID:20190049 for expression data; non-ribosomal peptide synthetase with adenylation and thiolation domains, reacts with the AMP derivative of L-allo-isoleucine to produce an aminoacyl thiolester intermediate during coronamic acid biosynthesis, see PMID: 14679222. | 0.521 |
| AAO54724.1 | AAO53766.1 | PSPTO_1197 | PSPTO_0220 | Conserved protein of unknown function; Similar to GB:M60091, GB:L46359, GB:L46360, GB:L46361, GB:L46362, GB:L48713, GB:L48715, GB:L48716, SP:P07902, PID:1066737, PID:1066749, PID:1066751, PID:1066753, PID:182951, PID:306759, PID:950351, PID:950353, PID:950355, PID:950357, PID:950365, PID:950367, PID:950369, PID:950377, PID:950381, PID:950383, PID:950391, PID:950393, PID:950395, PID:950397, PID:950399, PID:950401, PID:950403, and PID:950405; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GB:M60091, GB:L46359, GB:L46360, GB:L46361, GB:L4636 [...] | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | 0.741 |
| AAO54724.1 | AAO53928.1 | PSPTO_1197 | PSPTO_0384 | Conserved protein of unknown function; Similar to GB:M60091, GB:L46359, GB:L46360, GB:L46361, GB:L46362, GB:L48713, GB:L48715, GB:L48716, SP:P07902, PID:1066737, PID:1066749, PID:1066751, PID:1066753, PID:182951, PID:306759, PID:950351, PID:950353, PID:950355, PID:950357, PID:950365, PID:950367, PID:950369, PID:950377, PID:950381, PID:950383, PID:950391, PID:950393, PID:950395, PID:950397, PID:950399, PID:950401, PID:950403, and PID:950405; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GB:M60091, GB:L46359, GB:L46360, GB:L46361, GB:L4636 [...] | Transcriptional regulator, ArsR family; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR00740. | 0.710 |
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