Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AAO53976.1 | mtgA | PSPTO_0432 | PSPTO_0431 | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF04241. | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | 0.599 |
| AAO53976.1 | rlmL | PSPTO_0432 | PSPTO_2311 | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF04241. | Methylase, putative; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family. | 0.466 |
| AAO53976.1 | rlmM | PSPTO_0432 | PSPTO_2017 | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF04241. | Conserved hypothetical protein; Catalyzes the 2'-O-methylation at nucleotide C2498 in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily. | 0.544 |
| AAO53976.1 | thiG | PSPTO_0432 | PSPTO_0434 | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF04241. | Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.480 |
| AAO53976.1 | thiS | PSPTO_0432 | PSPTO_0433 | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF04241. | Thiamine biosynthesis protein ThiS; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01683. | 0.566 |
| AAO53976.1 | trmB | PSPTO_0432 | PSPTO_0435 | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF04241. | Methyltransferase, putative; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.473 |
| mtgA | AAO53976.1 | PSPTO_0431 | PSPTO_0432 | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF04241. | 0.599 |
| rlmL | AAO53976.1 | PSPTO_2311 | PSPTO_0432 | Methylase, putative; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF04241. | 0.466 |
| rlmL | rlmM | PSPTO_2311 | PSPTO_2017 | Methylase, putative; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family. | Conserved hypothetical protein; Catalyzes the 2'-O-methylation at nucleotide C2498 in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily. | 0.403 |
| rlmM | AAO53976.1 | PSPTO_2017 | PSPTO_0432 | Conserved hypothetical protein; Catalyzes the 2'-O-methylation at nucleotide C2498 in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF04241. | 0.544 |
| rlmM | rlmL | PSPTO_2017 | PSPTO_2311 | Conserved hypothetical protein; Catalyzes the 2'-O-methylation at nucleotide C2498 in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily. | Methylase, putative; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family. | 0.403 |
| thiG | AAO53976.1 | PSPTO_0434 | PSPTO_0432 | Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF04241. | 0.480 |
| thiG | thiS | PSPTO_0434 | PSPTO_0433 | Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | Thiamine biosynthesis protein ThiS; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01683. | 0.998 |
| thiG | trmB | PSPTO_0434 | PSPTO_0435 | Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | Methyltransferase, putative; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.781 |
| thiS | AAO53976.1 | PSPTO_0433 | PSPTO_0432 | Thiamine biosynthesis protein ThiS; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01683. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF04241. | 0.566 |
| thiS | thiG | PSPTO_0433 | PSPTO_0434 | Thiamine biosynthesis protein ThiS; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01683. | Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.998 |
| thiS | trmB | PSPTO_0433 | PSPTO_0435 | Thiamine biosynthesis protein ThiS; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01683. | Methyltransferase, putative; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.640 |
| trmB | AAO53976.1 | PSPTO_0435 | PSPTO_0432 | Methyltransferase, putative; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF04241. | 0.473 |
| trmB | thiG | PSPTO_0435 | PSPTO_0434 | Methyltransferase, putative; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.781 |
| trmB | thiS | PSPTO_0435 | PSPTO_0433 | Methyltransferase, putative; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | Thiamine biosynthesis protein ThiS; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01683. | 0.640 |