Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AAO53988.1 | AAO53989.1 | PSPTO_0444 | PSPTO_0445 | RNA polymerase sigma-70 family protein; Belongs to the sigma-70 factor family. ECF subfamily. | Regulatory protein, putative. | 0.962 |
| AAO53988.1 | AAO53990.1 | PSPTO_0444 | PSPTO_0446 | RNA polymerase sigma-70 family protein; Belongs to the sigma-70 factor family. ECF subfamily. | Membrane protein, putative; Identified by match to PFAM protein family HMM PF01309. | 0.745 |
| AAO53988.1 | AAO53991.1 | PSPTO_0444 | PSPTO_0447 | RNA polymerase sigma-70 family protein; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein; Identified by Glimmer2; putative. | 0.531 |
| AAO53988.1 | AAO54736.1 | PSPTO_0444 | PSPTO_1209 | RNA polymerase sigma-70 family protein; Belongs to the sigma-70 factor family. ECF subfamily. | RNA polymerase sigma-70 family protein; See PMID:20190049 for expression data; Belongs to the sigma-70 factor family. ECF subfamily. | 0.911 |
| AAO53988.1 | AAO54808.1 | PSPTO_0444 | PSPTO_1284 | RNA polymerase sigma-70 family protein; Belongs to the sigma-70 factor family. ECF subfamily. | TonB-dependent outer membrane heme receptor; See PMID:20190049 for expression data. | 0.576 |
| AAO53988.1 | AAO56937.1 | PSPTO_0444 | PSPTO_3462 | RNA polymerase sigma-70 family protein; Belongs to the sigma-70 factor family. ECF subfamily. | TonB-dependent siderophore receptor; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01783. | 0.470 |
| AAO53988.1 | AAO57584.1 | PSPTO_0444 | PSPTO_4128 | RNA polymerase sigma-70 family protein; Belongs to the sigma-70 factor family. ECF subfamily. | TonB-dependent siderophore receptor; Similar to GP:2981048; identified by sequence similarity; putative. | 0.765 |
| AAO53989.1 | AAO53988.1 | PSPTO_0445 | PSPTO_0444 | Regulatory protein, putative. | RNA polymerase sigma-70 family protein; Belongs to the sigma-70 factor family. ECF subfamily. | 0.962 |
| AAO53989.1 | AAO53990.1 | PSPTO_0445 | PSPTO_0446 | Regulatory protein, putative. | Membrane protein, putative; Identified by match to PFAM protein family HMM PF01309. | 0.646 |
| AAO53989.1 | AAO53991.1 | PSPTO_0445 | PSPTO_0447 | Regulatory protein, putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.553 |
| AAO53989.1 | AAO54736.1 | PSPTO_0445 | PSPTO_1209 | Regulatory protein, putative. | RNA polymerase sigma-70 family protein; See PMID:20190049 for expression data; Belongs to the sigma-70 factor family. ECF subfamily. | 0.842 |
| AAO53989.1 | AAO54808.1 | PSPTO_0445 | PSPTO_1284 | Regulatory protein, putative. | TonB-dependent outer membrane heme receptor; See PMID:20190049 for expression data. | 0.477 |
| AAO53989.1 | AAO56350.1 | PSPTO_0445 | PSPTO_2853 | Regulatory protein, putative. | TonB-dependent receptor, putative; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01783. | 0.634 |
| AAO53989.1 | AAO56937.1 | PSPTO_0445 | PSPTO_3462 | Regulatory protein, putative. | TonB-dependent siderophore receptor; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01783. | 0.640 |
| AAO53989.1 | AAO57584.1 | PSPTO_0445 | PSPTO_4128 | Regulatory protein, putative. | TonB-dependent siderophore receptor; Similar to GP:2981048; identified by sequence similarity; putative. | 0.720 |
| AAO53989.1 | AAO58979.1 | PSPTO_0445 | PSPTO_5560 | Regulatory protein, putative. | TonB-dependent receptor; Identified by match to TIGR protein family HMM TIGR01783. | 0.526 |
| AAO53990.1 | AAO53988.1 | PSPTO_0446 | PSPTO_0444 | Membrane protein, putative; Identified by match to PFAM protein family HMM PF01309. | RNA polymerase sigma-70 family protein; Belongs to the sigma-70 factor family. ECF subfamily. | 0.745 |
| AAO53990.1 | AAO53989.1 | PSPTO_0446 | PSPTO_0445 | Membrane protein, putative; Identified by match to PFAM protein family HMM PF01309. | Regulatory protein, putative. | 0.646 |
| AAO53990.1 | AAO53991.1 | PSPTO_0446 | PSPTO_0447 | Membrane protein, putative; Identified by match to PFAM protein family HMM PF01309. | Hypothetical protein; Identified by Glimmer2; putative. | 0.802 |
| AAO53990.1 | AAO53992.1 | PSPTO_0446 | PSPTO_0448 | Membrane protein, putative; Identified by match to PFAM protein family HMM PF01309. | Glutathione S-transferase, putative; See PMID:20190049 for expression data; similar to SP:P32105; identified by sequence similarity; putative. | 0.587 |
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