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fdhA-1 fdhA-1 adhC adhC AAO55079.1 AAO55079.1 fdhA-2 fdhA-2 amiE amiE fmdA fmdA purU-1 purU-1 AAO53939.1 AAO53939.1 soxG-1 soxG-1 AAO53946.1 AAO53946.1 soxA-1 soxA-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
fdhA-1Glutathione-independent formaldehyde dehydrogenase; See PMID:20190049 for expression data; similar to SP:P46154, GB:X64318, GB:U26173, GB:S79880, PID:1237118, and PID:30956; identified by sequence similarity; putative. (399 aa)    
Predicted Functional Partners:
adhC
Alcohol dehydrogenase, class III; See PMID:20190049 for expression data.
  
 
0.919
AAO55079.1
Esterase, putative; Serine hydrolase involved in the detoxification of formaldehyde.
  
 
 0.914
fdhA-2
Glutathione-independent formaldehyde dehydrogenase; Similar to SP:P46154; identified by sequence similarity; putative.
  
  
 
0.911
amiE
Aliphatic amidase; Is an aliphatic amidase with a restricted substrate specificity, as it only hydrolyzes formamide; Belongs to the carbon-nitrogen hydrolase superfamily. Aliphatic amidase family.
   
 0.823
fmdA
Formamidase; Similar to GP:4774513, and SP:Q50228; identified by sequence similarity; putative.
     
  0.800
purU-1
Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).
  
    0.702
AAO53939.1
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.675
soxG-1
Sarcosine oxidase, gamma subunit; Similar to SP:Q46338, GB:U11053, GB:U17298, GB:L36130, SP:P41145, PID:532060, PID:595933, PID:596070, PID:598185, and PID:722618; identified by sequence similarity; putative.
 
    0.657
AAO53946.1
Iron-sulfur cluster-binding protein; Similar to GP:15073802; identified by sequence similarity; putative.
 
  
 0.648
soxA-1
Sarcosine oxidase, alpha subunit; Similar to SP:Q46337; identified by sequence similarity; putative; Belongs to the GcvT family.
 
  
 0.637
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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