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soxA-1 soxA-1 soxG-1 soxG-1 soxD-1 soxD-1 soxB-1 soxB-1 soxD-2 soxD-2 gcvP gcvP soxG-2 soxG-2 soxB-2 soxB-2 AAO53801.1 AAO53801.1 AAO56026.1 AAO56026.1 soxA-2 soxA-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
soxA-1Sarcosine oxidase, alpha subunit; Similar to SP:Q46337; identified by sequence similarity; putative; Belongs to the GcvT family. (1006 aa)    
Predicted Functional Partners:
soxG-1
Sarcosine oxidase, gamma subunit; Similar to SP:Q46338, GB:U11053, GB:U17298, GB:L36130, SP:P41145, PID:532060, PID:595933, PID:596070, PID:598185, and PID:722618; identified by sequence similarity; putative.
 
 0.999
soxD-1
Sarcosine oxidase, delta subunit; Similar to SP:Q46336, GB:U11053, GB:U17298, GB:L36130, SP:P41145, PID:532060, PID:595933, PID:596070, PID:598185, and PID:722618; identified by sequence similarity; putative.
 0.999
soxB-1
Sarcosine oxidase, beta subunit; Similar to GP:14023472, and SP:P40875; identified by sequence similarity; putative.
 
 0.998
soxD-2
Sarcosine oxidase, delta subunit; Similar to GP:13241963, and SP:Q46336; identified by sequence similarity; putative.
 
 0.998
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
 
 0.997
soxG-2
Sarcosine oxidase, gamma subunit; Similar to SP:Q46338; identified by sequence similarity; putative.
 
 0.996
soxB-2
Sarcosine oxidase, beta subunit; Similar to SP:P40875; identified by sequence similarity; putative.
 
 0.995
AAO53801.1
Oxidoreductase, FAD-binding protein; Similar to GP:2665709; identified by sequence similarity; putative.
 0.977
AAO56026.1
Oxidoreductase, FAD-binding protein; Similar to GP:2665709; identified by sequence similarity; putative.
 0.976
soxA-2
Sarcosine oxidase, alpha subunit; Similar to SP:Q46337; identified by sequence similarity; putative; Belongs to the GcvT family.
 
  
0.955
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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