STRINGSTRING
AAO54023.1 AAO54023.1 AAO54019.1 AAO54019.1 AAO54020.1 AAO54020.1 AAO54021.1 AAO54021.1 AAO54022.1 AAO54022.1 AAO58516.1 AAO58516.1 AAO56051.1 AAO56051.1 AAO58849.1 AAO58849.1 AAO56052.1 AAO56052.1 AAO57795.1 AAO57795.1 AAO58854.1 AAO58854.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAO54023.1Conserved domain protein; Similar to GP:17427973; identified by sequence similarity; putative. (188 aa)    
Predicted Functional Partners:
AAO54019.1
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
AAO54020.1
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
AAO54021.1
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
AAO54022.1
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
AAO58516.1
Conserved hypothetical protein; Similar to GP:15978939; identified by sequence similarity; putative.
  
   
 0.616
AAO56051.1
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
  
 0.614
AAO58849.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
 
  
 0.578
AAO56052.1
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
   
 0.563
AAO57795.1
Conserved domain protein.
 
   
 0.547
AAO58854.1
Conserved protein of unknown function; Identified by Glimmer2; putative; see PMID:20190049 for expression data; identified by Glimmer.
 
  
 0.528
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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