STRINGSTRING
AAO54050.1 AAO54050.1 AAO56774.1 AAO56774.1 cycB cycB AAO53960.1 AAO53960.1 AAO56346.1 AAO56346.1 nuoI nuoI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAO54050.1Conserved hypothetical protein. (53 aa)    
Predicted Functional Partners:
AAO56774.1
Transporter, putative; See PMID:20190049 for expression data; similar to GB:X04143, SP:P02818, and PID:29450; identified by sequence similarity; putative.
  
     0.422
cycB
Cytochrome c5; See PMID:20190049 for expression data; similar to GB:Z11766, and PID:47029; identified by sequence similarity; putative.
    
   0.403
AAO53960.1
Ferredoxin; Similar to GP:1518927, GB:M23219, SP:P17583, PID:145644, GB:U00096, PID:1657537, and PID:1786536; identified by sequence similarity; putative.
    
   0.403
AAO56346.1
Cytochrome c family protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00034.
    
   0.403
nuoI
NADH dehydrogenase I, I subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
    
   0.403
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
Server load: low (22%) [HD]