STRINGSTRING
AAO54098.1 AAO54098.1 AAO54097.1 AAO54097.1 murB murB murA murA murC murC AAO54099.1 AAO54099.1 AAO54599.1 AAO54599.1 AAO57789.1 AAO57789.1 AAO58666.1 AAO58666.1 AAO56924.1 AAO56924.1 rfbC-1 rfbC-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AAO54098.1Nucleotidyltransferase family protein; See PMID:20190049 for expression data. (210 aa)    
Predicted Functional Partners:
AAO54097.1
Conserved protein of unknown function; See PMID:20190049 for expression data; similar to GP:4545243, and GP:4545243; identified by sequence similarity; putative.
 
 
 0.990
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
    
  0.902
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
    
 0.811
murC
UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
    
 0.806
AAO54099.1
DnaJ-like protein DjlA, putative; See PMID:20190049 for expression data.
  
    0.802
AAO54599.1
Lipopolysaccharide biosynthesis protein; Similar to GP:2558982, and GP:14090396; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:2558982, and GP:14090396, identified by sequence similarity, putative.
  
  
 0.802
AAO57789.1
Oxidoreductase, iron-sulfur-binding protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00970.
  
 
 0.692
AAO58666.1
Oxidoreductase, iron-sulfur-binding protein; See PMID:20190049 for expression data.
  
 
 0.692
AAO56924.1
Capsular polysaccharide biosynthesis protein; Similar to SP:Q48460; identified by sequence similarity; putative.
  
  
 0.656
rfbC-1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.652
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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