STRINGSTRING
AAO54262.1 AAO54262.1 AAO54261.1 AAO54261.1 AAO54260.1 AAO54260.1 AAO58809.1 AAO58809.1 AAO54259.1 AAO54259.1 AAO54258.1 AAO54258.1 AAO53966.1 AAO53966.1 AAO58797.1 AAO58797.1 AAO54542.1 AAO54542.1 AAO58796.1 AAO58796.1 AAO54065.1 AAO54065.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAO54262.1Conserved protein of unknown function; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01381. (89 aa)    
Predicted Functional Partners:
AAO54261.1
Protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
   
 
 0.906
AAO54260.1
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
AAO58809.1
Stability cassette protein, putative; See PMID:20190049 for expression data; similar to GP:3986434, and GP:3986434; identified by sequence similarity; putative.
   
 
 0.595
AAO54259.1
DNA-binding protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01381.
     
 0.555
AAO54258.1
DNA-binding protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01381.
     
 0.514
AAO53966.1
Virulence-associated protein, putative; See PMID:20190049 for expression data.
 
   
 0.462
AAO58797.1
Conserved protein of unknown function; See PMID:20190049 for expression data; similar to GP:15979156; identified by sequence similarity; putative.
 
     0.461
AAO54542.1
Identified by match to PFAM protein family HMM PF00857.
   
    0.457
AAO58796.1
Conserved protein of unknown function; See PMID:20190049 for expression data; similar to GP:17131494, and GP:17131494; identified by sequence similarity; putative.
 
     0.455
AAO54065.1
Conserved domain protein; See PMID:20190049 for expression data.
 
   
 0.452
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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