STRINGSTRING
AAO54263.1 AAO54263.1 AAO57503.1 AAO57503.1 AAO54122.1 AAO54122.1 AAO58382.1 AAO58382.1 AAO54524.1 AAO54524.1 AAO54522.1 AAO54522.1 AAO56283.1 AAO56283.1 AAO55172.1 AAO55172.1 ppa-1 ppa-1 AAO54807.1 AAO54807.1 AAO55607.1 AAO55607.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAO54263.1Transcriptional regulator, putative. (243 aa)    
Predicted Functional Partners:
AAO57503.1
Tail tape measure protein; Similar to GP:17484037; identified by sequence similarity; putative.
  
  
 0.587
AAO54122.1
Tail tape measure protein; Similar to GP:18152378; identified by sequence similarity; putative.
  
     0.579
AAO58382.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
     0.526
AAO54524.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
     0.484
AAO54522.1
Conserved protein of unknown function; See PMID:20190049 for expression data.
  
     0.463
AAO56283.1
Identified by match to PFAM protein family HMM PF00580.
  
     0.454
AAO55172.1
Conserved hypothetical protein; Identified by match to PFAM protein family HMM PF02498.
 
  
 0.439
ppa-1
Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
       0.438
AAO54807.1
Heme oxygenase, putative; See PMID:20190049 for expression data.
  
     0.430
AAO55607.1
Host specificity protein J, internal deletion; Similar to SP:P03749; identified by sequence similarity; putative.
  
  
 0.411
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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