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AAO54266.1 AAO54266.1 AAO54265.1 AAO54265.1 cycB cycB ppa-1 ppa-1 AAO55936.1 AAO55936.1 glyA-2 glyA-2 bamB bamB AAO54267.1 AAO54267.1 AAO53951.1 AAO53951.1 AAO58678.1 AAO58678.1 nadA nadA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AAO54266.1DedA family protein; See PMID:20190049 for expression data. (215 aa)    
Predicted Functional Partners:
AAO54265.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer; Belongs to the MtfA family.
  
  
 0.862
cycB
Cytochrome c5; See PMID:20190049 for expression data; similar to GB:Z11766, and PID:47029; identified by sequence similarity; putative.
      
 0.739
ppa-1
Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
     
 0.566
AAO55936.1
Serine hydroxymethyltransferase, putative; Similar to GB:Z35428, PID:515905, and SP:P53522; identified by sequence similarity; putative.
      
 0.508
glyA-2
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
      
 0.508
bamB
PQQ enzyme repeat domain protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
      
 0.500
AAO54267.1
Acetyltransferase, GNAT family; See PMID:20190049 for expression data.
       0.492
AAO53951.1
Drug resistance transporter, EmrB/QacA family; Identified by match to TIGR protein family HMM TIGR00894; Belongs to the major facilitator superfamily.
  
     0.489
AAO58678.1
DedA family protein; See PMID:20190049 for expression data.
  
   
 0.489
nadA
Quinolinate synthetase complex, subunit A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate; Belongs to the quinolinate synthase A family. Type 1 subfamily.
     
 0.473
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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