STRINGSTRING
AAO54276.1 AAO54276.1 AAO58657.1 AAO58657.1 fadB fadB cfa6 cfa6 AAO56246.1 AAO56246.1 AAO54279.1 AAO54279.1 AAO54274.1 AAO54274.1 AAO54275.1 AAO54275.1 AAO54278.1 AAO54278.1 AAO54277.1 AAO54277.1 AAO56225.1 AAO56225.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
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Cooccurrence
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Experiments
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Textmining
[Homology]
Score
AAO54276.1MaoC-like domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01575. (151 aa)    
Predicted Functional Partners:
AAO58657.1
Oxidoreductase, zinc-binding protein.
 
 0.906
fadB
Fatty oxidation complex, alpha subunit; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
  
 0.689
cfa6
Coronafacic acid polyketide synthase I; This gene is the first of two multimodular polyketide synthetases involved in the biosynthesis of coronafacic acid. This synthetase is proposed to receive CPC (2-carboxy-2-cyclopentenone) from an acyl carrier protein (cfa1), it then adds a buyrate group and then completely reduces the ketone of the (former) carboxylate group. The resulting product is then passed to the second polyketide synthetase (cfa7); similar to GP:13346874; identified by sequence similarity; putative; see PMID:20190049 for expression data; This gene is the first of two multi [...]
  
 0.647
AAO56246.1
acyl-CoA dehydrogenase family protein; See PMID:20190049 for expression data.
 
 0.630
AAO54279.1
ATP-dependent protease La domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02190.
 
 
   0.612
AAO54274.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01118.
   
 
 0.558
AAO54275.1
MORN repeat family protein; See PMID:20190049 for expression data.
     
 0.557
AAO54278.1
Membrane protein, putative; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF04172.
       0.549
AAO54277.1
LrgA family protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF03788.
       0.547
AAO56225.1
Conserved hypothetical protein; Identified by match to PFAM protein family HMM PF01636.
 
 
 0.542
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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