STRINGSTRING
AAO54301.1 AAO54301.1 AAO54311.1 AAO54311.1 AAO54309.1 AAO54309.1 AAO54880.1 AAO54880.1 AAO54310.1 AAO54310.1 AAO54877.1 AAO54877.1 AAO54881.1 AAO54881.1 AAO54689.1 AAO54689.1 AAO54688.1 AAO54688.1 AAO54882.1 AAO54882.1 AAO54300.1 AAO54300.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
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Coexpression
Experiments
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[Homology]
Score
AAO54301.1Bmp family protein; Similar to GP:4581460; identified by sequence similarity; putative. (364 aa)    
Predicted Functional Partners:
AAO54311.1
ABC transporter, ATP-binding protein; Identified by match to TIGR protein family HMM TIGR00955.
 
 
 0.971
AAO54309.1
ABC transporter, permease protein; Identified by match to PFAM protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.968
AAO54880.1
ABC transporter, permease protein; Similar to SP:P09142, and PID:45593; identified by sequence similarity; putative; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.967
AAO54310.1
ABC transporter, permease protein, putative; Similar to GP:13937515; identified by sequence similarity; putative; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.965
AAO54877.1
ABC transporter, ATP-binding protein; Similar to SP:P09142, and PID:45593; identified by sequence similarity; putative.
 
 
 0.964
AAO54881.1
ABC transporter, permease protein; Identified by match to PFAM protein family HMM PF03073; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.964
AAO54689.1
ABC transporter, ATP-binding protein; Similar to GP:15023582; identified by sequence similarity; putative.
 
 
 0.958
AAO54688.1
Bmp family protein; Similar to GP:13937517; identified by sequence similarity; putative.
  
  
 
0.917
AAO54882.1
Bmp family protein; Similar to SP:P04772, and PID:39533; identified by sequence similarity; putative.
  
  
 
0.915
AAO54300.1
Oxidoreductase, 2OG-Fe(II) oxygenase family; Identified by match to PFAM protein family HMM PF03171; Belongs to the iron/ascorbate-dependent oxidoreductase family.
       0.604
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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