STRINGSTRING
AAO54312.1 AAO54312.1 AAO54313.1 AAO54313.1 AAO54314.1 AAO54314.1 AAO58209.1 AAO58209.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAO54312.1Conserved hypothetical protein. (197 aa)    
Predicted Functional Partners:
AAO54313.1
Transcriptional regulator, TetR family.
       0.696
AAO54314.1
Xanthine/uracil permease family protein; Similar to SP:P42086; identified by sequence similarity; putative.
       0.511
AAO58209.1
Conserved hypothetical protein; Identified by match to PFAM protein family HMM PF00633.
   
    0.408
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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