STRINGSTRING
AAO54313.1 AAO54313.1 AAO54312.1 AAO54312.1 AAO54314.1 AAO54314.1 AAO57139.1 AAO57139.1 AAO57135.1 AAO57135.1 guaD guaD AAO54315.1 AAO54315.1 allA allA AAO57131.1 AAO57131.1 AAO57967.1 AAO57967.1 cmaA cmaA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAO54313.1Transcriptional regulator, TetR family. (218 aa)    
Predicted Functional Partners:
AAO54312.1
Conserved hypothetical protein.
       0.696
AAO54314.1
Xanthine/uracil permease family protein; Similar to SP:P42086; identified by sequence similarity; putative.
 
     0.599
AAO57139.1
Membrane protein, putative; Similar to GP:9947470; identified by sequence similarity; putative.
 
     0.534
AAO57135.1
Polysaccharide deacetylase family protein; See PMID:20190049 for expression data.
  
   
 0.500
guaD
Guanine aminohydrolase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
     0.476
AAO54315.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
 
 
   0.471
allA
Ureidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source.
  
     0.464
AAO57131.1
Xanthine dehydrogenase accessory factor XdhC, putative; See PMID:20190049 for expression data.
 
     0.433
AAO57967.1
This gene is aparrently the terminal component of a non-ribosomal peptide synthetase (due to the presence of the terminal thioesterase domain) and is most likely associated with the previous gene which appears to be a initiating component. This gene contains three complete amino acid activation, thiolation and condensation domain modules and appears to be specific for glycine, an unidentified amino acid and serine according to the prediction algorithm at http://raynam.chm.jhu.edu/; nrps/index2.html. Taken together these two genes appear to direct the biosynthesis of a previously undesc [...]
     
 0.404
cmaA
Coronamic acid synthetase CmaA; Non-ribosomal peptide synthetase with adenylation and thiolation domains; reacts with the AMP derivative of L-allo-isoleucine to produce an aminoacyl thiolester intermediate during coronamic acid biosynthesis; see PMID: 14679222; see PMID:20190049 for expression data; non-ribosomal peptide synthetase with adenylation and thiolation domains, reacts with the AMP derivative of L-allo-isoleucine to produce an aminoacyl thiolester intermediate during coronamic acid biosynthesis, see PMID: 14679222.
     
 0.404
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.