STRINGSTRING
ndH ndH tatA tatA tatB tatB tatC tatC AAO54453.1 AAO54453.1 AAO54454.1 AAO54454.1 cioA cioA AAO54452.1 AAO54452.1 AAO54455.1 AAO54455.1 AAO56946.1 AAO56946.1 ccoP ccoP
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ndHNADH dehydrogenase; See PMID:20190049 for expression data. (432 aa)    
Predicted Functional Partners:
tatA
Sec-independent protein translocase TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
      
 0.713
tatB
Sec-independent protein translocase TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.
      
 0.713
tatC
Sec-independent protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.
      
 0.698
AAO54453.1
MOSC domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF03473.
       0.571
AAO54454.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
       0.571
cioA
Cyanide-insensitive terminal oxidase CioA; See PMID:20190049 for expression data.
 
   
 0.564
AAO54452.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
       0.533
AAO54455.1
Hypothetical protein; Identified by Glimmer2; putative.
       0.513
AAO56946.1
Monovalent cation:proton antiporter, putative; Similar to GP:15155444, and GP:1072395; identified by sequence similarity; putative.
  
  
 0.508
ccoP
Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
     
 0.495
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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