Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AAO54531.1 | AAO54532.1 | PSPTO_0997 | PSPTO_0998 | Identified by match to PFAM protein family HMM PF03334. | Alkylphosphonate utilization operon protein PhnA, putative; See PMID:20190049 for expression data; similar to GP:9945956; identified by sequence similarity; putative. | 0.505 |
AAO54532.1 | AAO54531.1 | PSPTO_0998 | PSPTO_0997 | Alkylphosphonate utilization operon protein PhnA, putative; See PMID:20190049 for expression data; similar to GP:9945956; identified by sequence similarity; putative. | Identified by match to PFAM protein family HMM PF03334. | 0.505 |
AAO54532.1 | AAO58445.1 | PSPTO_0998 | PSPTO_5017 | Alkylphosphonate utilization operon protein PhnA, putative; See PMID:20190049 for expression data; similar to GP:9945956; identified by sequence similarity; putative. | Bifunctional putA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.418 |
AAO58445.1 | AAO54532.1 | PSPTO_5017 | PSPTO_0998 | Bifunctional putA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Alkylphosphonate utilization operon protein PhnA, putative; See PMID:20190049 for expression data; similar to GP:9945956; identified by sequence similarity; putative. | 0.418 |