STRINGSTRING
trxB trxB trx-2 trx-2 trxA trxA kdgK kdgK ahpC ahpC rpe rpe sucA sucA nrdA nrdA trx-1 trx-1 AAO58743.1 AAO58743.1 metG metG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
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trxBThioredoxin reductase; Identified by match to TIGR protein family HMM TIGR01812; see PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01812. (320 aa)    
Predicted Functional Partners:
trx-2
Thioredoxin; See PMID:20190049 for expression data; Belongs to the thioredoxin family.
 
 0.966
trxA
Thioredoxin; Similar to SP:P56430, GB:X78992, SP:P47974, PID:509778, and PID:984509; identified by sequence similarity; putative.
  
 
 0.905
kdgK
2-dehydro-3-deoxygluconokinase; See PMID:20190049 for expression data; similar to SP:P37647, GB:Y00318, SP:P05156, PID:1335054, PID:1335055, PID:1335056, and PID:182607; identified by sequence similarity; putative.
    
 0.902
ahpC
Alkyl hydroperoxide reductase, subunit C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
  
 
 0.870
rpe
Ribulose-phosphate 3-epimerase; See PMID:20190049 for expression data; Belongs to the ribulose-phosphate 3-epimerase family.
  
 
 0.837
sucA
2-oxoglutarate dehydrogenase, E1 component; Identified by match to PFAM protein family HMM PF02779; see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02779.
   
  
 0.752
nrdA
Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
     
 0.722
trx-1
Thioredoxin; See PMID:20190049 for expression data.
  
 
 0.721
AAO58743.1
Antioxidant, AhpC/Tsa family; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00578.
  
 
 0.653
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
 
 
 0.640
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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