STRINGSTRING
AAO54829.1 AAO54829.1 AAO55004.1 AAO55004.1 AAO57991.1 AAO57991.1 AAO53782.1 AAO53782.1 AAO57352.1 AAO57352.1 AAO54681.1 AAO54681.1 AAO54803.1 AAO54803.1 AAO58442.1 AAO58442.1 AAO57537.1 AAO57537.1 AAO55257.1 AAO55257.1 AAO58077.1 AAO58077.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAO54829.1GGDEF domain protein; See PMID:20190049 for expression data. (502 aa)    
Predicted Functional Partners:
AAO55004.1
Response regulator/EAL domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00072.
 
 0.842
AAO57991.1
GAF domain/GGDEF domain/EAL domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00990.
 
 0.825
AAO53782.1
EAL domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00563.
 
  
 0.809
AAO57352.1
EAL domain/GGDEF domain protein; Similar to GP:9949382; identified by sequence similarity; putative.
  
  
 0.749
AAO54681.1
HDIG domain protein; Similar to GP:9950310; identified by sequence similarity; putative.
 
 
 0.625
AAO54803.1
Sensory box protein/response regulator; See PMID:20190049 for expression data.
 
0.577
AAO58442.1
Response regulator/sensory box/GGDEF domain/EAL domain protein; See PMID:20190049 for expression data.
 
 
0.575
AAO57537.1
DNA-binding response regulator, LuxR family.
 
 
  
 0.526
AAO55257.1
Sensory box/GGDEF domain/EAL domain protein; See PMID:20190049 for expression data.
 
 
0.523
AAO58077.1
Sensory box/GGDEF domain/EAL domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00989.
 
 
0.523
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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