STRINGSTRING
AAO54832.1 AAO54832.1 AAO54833.1 AAO54833.1 AAO56254.1 AAO56254.1 AAO54830.1 AAO54830.1 AAO54831.1 AAO54831.1 AAO56256.1 AAO56256.1 mexE mexE AAO58619.1 AAO58619.1 AAO56097.1 AAO56097.1 AAO56778.1 AAO56778.1 AAO57754.1 AAO57754.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAO54832.1AcrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1034 aa)    
Predicted Functional Partners:
AAO54833.1
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.969
AAO56254.1
HlyD family secretion protein; See PMID:20190049 for expression data; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.859
AAO54830.1
Heavy metal sensor histidine kinase; Member of a two-component regulatory system.
     
 0.795
AAO54831.1
DNA-binding heavy metal response regulator; See PMID:20190049 for expression data.
     
 0.794
AAO56256.1
Outer membrane efflux protein; See PMID:20190049 for expression data.
  
 0.639
mexE
Multidrug efflux RND membrane fusion protein MexE; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.625
AAO58619.1
Efflux transporter, RND family, MFP subunit; See PMID:20190049 for expression data; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.618
AAO56097.1
Multidrug resistance protein, AcrA/AcrE family; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.614
AAO56778.1
Efflux transporter, RND family, MFP subunit; Identified by match to TIGR protein family HMM TIGR00998; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.606
AAO57754.1
Efflux transporter, RND family, MFP subunit; See PMID:20190049 for expression data; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.587
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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