Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AAO54837.1 | AAO54840.1 | PSPTO_1313 | PSPTO_1318 | Pili assembly chaperone; Similar to GP:39717, and SP:P33409; identified by sequence similarity; putative. | Conserved hypothetical protein; Similar to SP:P75748; identified by sequence similarity; putative. | 0.531 |
AAO54837.1 | fimD | PSPTO_1313 | PSPTO_2228 | Pili assembly chaperone; Similar to GP:39717, and SP:P33409; identified by sequence similarity; putative. | Outer membrane usher protein fimD. | 0.946 |
AAO54839.1 | AAO54840.1 | PSPTO_1317 | PSPTO_1318 | Fimbral chaperone protein; Similar to GP:39717, and SP:P33409; identified by sequence similarity; putative. | Conserved hypothetical protein; Similar to SP:P75748; identified by sequence similarity; putative. | 0.888 |
AAO54839.1 | AAO54841.1 | PSPTO_1317 | PSPTO_1319 | Fimbral chaperone protein; Similar to GP:39717, and SP:P33409; identified by sequence similarity; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.620 |
AAO54839.1 | fimD | PSPTO_1317 | PSPTO_2228 | Fimbral chaperone protein; Similar to GP:39717, and SP:P33409; identified by sequence similarity; putative. | Outer membrane usher protein fimD. | 0.960 |
AAO54840.1 | AAO54837.1 | PSPTO_1318 | PSPTO_1313 | Conserved hypothetical protein; Similar to SP:P75748; identified by sequence similarity; putative. | Pili assembly chaperone; Similar to GP:39717, and SP:P33409; identified by sequence similarity; putative. | 0.531 |
AAO54840.1 | AAO54839.1 | PSPTO_1318 | PSPTO_1317 | Conserved hypothetical protein; Similar to SP:P75748; identified by sequence similarity; putative. | Fimbral chaperone protein; Similar to GP:39717, and SP:P33409; identified by sequence similarity; putative. | 0.888 |
AAO54840.1 | AAO54841.1 | PSPTO_1318 | PSPTO_1319 | Conserved hypothetical protein; Similar to SP:P75748; identified by sequence similarity; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.654 |
AAO54840.1 | fimD | PSPTO_1318 | PSPTO_2228 | Conserved hypothetical protein; Similar to SP:P75748; identified by sequence similarity; putative. | Outer membrane usher protein fimD. | 0.529 |
AAO54840.1 | papD | PSPTO_1318 | PSPTO_2229 | Conserved hypothetical protein; Similar to SP:P75748; identified by sequence similarity; putative. | Chaperone protein PapD. | 0.499 |
AAO54841.1 | AAO54839.1 | PSPTO_1319 | PSPTO_1317 | Hypothetical protein; Identified by Glimmer2; putative. | Fimbral chaperone protein; Similar to GP:39717, and SP:P33409; identified by sequence similarity; putative. | 0.620 |
AAO54841.1 | AAO54840.1 | PSPTO_1319 | PSPTO_1318 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Similar to SP:P75748; identified by sequence similarity; putative. | 0.654 |
fimD | AAO54837.1 | PSPTO_2228 | PSPTO_1313 | Outer membrane usher protein fimD. | Pili assembly chaperone; Similar to GP:39717, and SP:P33409; identified by sequence similarity; putative. | 0.946 |
fimD | AAO54839.1 | PSPTO_2228 | PSPTO_1317 | Outer membrane usher protein fimD. | Fimbral chaperone protein; Similar to GP:39717, and SP:P33409; identified by sequence similarity; putative. | 0.960 |
fimD | AAO54840.1 | PSPTO_2228 | PSPTO_1318 | Outer membrane usher protein fimD. | Conserved hypothetical protein; Similar to SP:P75748; identified by sequence similarity; putative. | 0.529 |
fimD | papD | PSPTO_2228 | PSPTO_2229 | Outer membrane usher protein fimD. | Chaperone protein PapD. | 0.986 |
papD | AAO54840.1 | PSPTO_2229 | PSPTO_1318 | Chaperone protein PapD. | Conserved hypothetical protein; Similar to SP:P75748; identified by sequence similarity; putative. | 0.499 |
papD | fimD | PSPTO_2229 | PSPTO_2228 | Chaperone protein PapD. | Outer membrane usher protein fimD. | 0.986 |