STRINGSTRING
AAO54852.1 AAO54852.1 AAO54853.1 AAO54853.1 AAO56924.1 AAO56924.1 AAO54220.1 AAO54220.1 AAO58419.1 AAO58419.1 waaP waaP waaG waaG rfaF rfaF waaC waaC AAO57004.1 AAO57004.1 galE galE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
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Coexpression
Experiments
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[Homology]
Score
AAO54852.1Glycosyl transferase, group 2 family protein; See PMID:20190049 for expression data; similar to GP:1781503, GB:J04114, SP:P12636, and PID:152102; identified by sequence similarity; putative. (294 aa)    
Predicted Functional Partners:
AAO54853.1
Acetyltransferase, CysE/LacA/LpxA/NodL family; See PMID:20190049 for expression data; similar to SP:P26838; identified by sequence similarity; putative.
 
  
 0.664
AAO56924.1
Capsular polysaccharide biosynthesis protein; Similar to SP:Q48460; identified by sequence similarity; putative.
 
  
 0.580
AAO54220.1
NAD-dependent epimerase/dehydratase family protein; See PMID:20190049 for expression data.
 
 
 0.567
AAO58419.1
Glycosyl transferase, group 1 family protein; See PMID:20190049 for expression data.
 
 
 0.545
waaP
Lipopolysaccharide core biosynthesis protein WaaP; Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core; Belongs to the protein kinase superfamily. KdkA/rfaP family.
  
 
 0.505
waaG
Lipopolysaccharide core biosynthesis protein WaaG; See PMID:20190049 for expression data; similar to GB:X55137; identified by sequence similarity; putative.
  
 
 0.505
rfaF
ADP-heptose--LPS heptosyltransferase II; See PMID:20190049 for expression data; similar to SP:P37692, GB:U14003, SP:P39352, PID:537120, GB:U00096, and PID:1790730; identified by sequence similarity; putative.
  
  
 0.497
waaC
Lipopolysaccharide heptosyltransferase; See PMID:20190049 for expression data; similar to SP:P24173; identified by sequence similarity; putative.
  
  
 0.496
AAO57004.1
Capsular polysaccharide biosynthesis protein PslA; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02719.
 
  
 0.480
galE
UDP-glucose 4-epimerase; Identified by match to TIGR protein family HMM TIGR01777; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
   
 0.473
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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