STRINGSTRING
AAO55098.1 AAO55098.1 AAO55099.1 AAO55099.1 AAO56402.1 AAO56402.1 AAO55100.1 AAO55100.1 AAO57060.1 AAO57060.1 AAO58058.1 AAO58058.1 AAO57015.1 AAO57015.1 AAO56416.1 AAO56416.1 pcaQ pcaQ AAO56430.1 AAO56430.1 AAO56316.1 AAO56316.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AAO55098.1Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (297 aa)    
Predicted Functional Partners:
AAO55099.1
Major facilitator family transporter.
 
   
 0.752
AAO56402.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.678
AAO55100.1
Conserved hypothetical protein; Similar to GP:6580778, and SP:Q01609; identified by sequence similarity; putative.
 
     0.606
AAO57060.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.555
AAO58058.1
Transcriptional regulator, LysR family; See PMID:20190049 for expression data; similar to GB:X61072, and PID:33512; identified by sequence similarity; putative; Belongs to the LysR transcriptional regulatory family.
  
     0.550
AAO57015.1
Transcriptional regulator, LysR family; Similar to GP:15021663; identified by sequence similarity; putative; Belongs to the LysR transcriptional regulatory family.
  
     0.527
AAO56416.1
Nitrogen assimilation regulatory protein Nac, putative; Similar to SP:Q47005, GB:X64063, SP:P28765, and PID:1335662; identified by sequence similarity; putative; Belongs to the LysR transcriptional regulatory family.
  
     0.518
pcaQ
Pca operon transcriptional activator PcaQ; See PMID:20190049 for expression data; similar to GP:10442737, and SP:P52668; identified by sequence similarity; putative; Belongs to the LysR transcriptional regulatory family.
  
     0.512
AAO56430.1
Transcriptional regulator, LysR family; Identified by match to PFAM protein family HMM PF01047; Belongs to the LysR transcriptional regulatory family.
  
     0.490
AAO56316.1
Conserved domain protein; Similar to GP:15158870, and GP:15980012; identified by sequence similarity; putative.
  
    0.487
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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