Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AAO55145.1 | AAO55146.1 | PSPTO_1625 | PSPTO_1626 | Conserved protein of unknown function; See PMID:20190049 for expression data. | Conserved hypothetical protein; Similar to GP:15488041; identified by sequence similarity; putative. | 0.507 |
AAO55145.1 | AAO57647.1 | PSPTO_1625 | PSPTO_4191 | Conserved protein of unknown function; See PMID:20190049 for expression data. | Conserved hypothetical protein; Identified by match to PFAM protein family HMM PF00905. | 0.469 |
AAO55146.1 | AAO55145.1 | PSPTO_1626 | PSPTO_1625 | Conserved hypothetical protein; Similar to GP:15488041; identified by sequence similarity; putative. | Conserved protein of unknown function; See PMID:20190049 for expression data. | 0.507 |
AAO55146.1 | AAO55147.1 | PSPTO_1626 | PSPTO_1627 | Conserved hypothetical protein; Similar to GP:15488041; identified by sequence similarity; putative. | Oxidoreductase, short chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.570 |
AAO55146.1 | AAO57647.1 | PSPTO_1626 | PSPTO_4191 | Conserved hypothetical protein; Similar to GP:15488041; identified by sequence similarity; putative. | Conserved hypothetical protein; Identified by match to PFAM protein family HMM PF00905. | 0.410 |
AAO55147.1 | AAO55146.1 | PSPTO_1627 | PSPTO_1626 | Oxidoreductase, short chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Conserved hypothetical protein; Similar to GP:15488041; identified by sequence similarity; putative. | 0.570 |
AAO57647.1 | AAO55145.1 | PSPTO_4191 | PSPTO_1625 | Conserved hypothetical protein; Identified by match to PFAM protein family HMM PF00905. | Conserved protein of unknown function; See PMID:20190049 for expression data. | 0.469 |
AAO57647.1 | AAO55146.1 | PSPTO_4191 | PSPTO_1626 | Conserved hypothetical protein; Identified by match to PFAM protein family HMM PF00905. | Conserved hypothetical protein; Similar to GP:15488041; identified by sequence similarity; putative. | 0.410 |