Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AAO54221.1 | AAO55183.1 | PSPTO_0679 | PSPTO_1663 | Outer membrane protein OmpW; See PMID:20190049 for expression data. | Acetyltransferase, GNAT family; Identified by match to TIGR protein family HMM TIGR01575. | 0.437 |
| AAO54221.1 | AAO55187.1 | PSPTO_0679 | PSPTO_1667 | Outer membrane protein OmpW; See PMID:20190049 for expression data. | Universal stress protein family; See PMID:20190049 for expression data. | 0.526 |
| AAO54221.1 | hemN | PSPTO_0679 | PSPTO_1993 | Outer membrane protein OmpW; See PMID:20190049 for expression data. | Oxygen-independent coproporphyrinogen III oxidase; See PMID:20190049 for expression data; similar to SP:P32131; identified by sequence similarity; putative; Belongs to the anaerobic coproporphyrinogen-III oxidase family. | 0.820 |
| AAO54221.1 | xfp | PSPTO_0679 | PSPTO_1670 | Outer membrane protein OmpW; See PMID:20190049 for expression data. | Xylulose-5-phosphate/fructose-6-phosphate phosphoketolase; Similar to SP:Q9AEM9; identified by sequence similarity; putative. | 0.422 |
| AAO55183.1 | AAO54221.1 | PSPTO_1663 | PSPTO_0679 | Acetyltransferase, GNAT family; Identified by match to TIGR protein family HMM TIGR01575. | Outer membrane protein OmpW; See PMID:20190049 for expression data. | 0.437 |
| AAO55183.1 | AAO55184.1 | PSPTO_1663 | PSPTO_1664 | Acetyltransferase, GNAT family; Identified by match to TIGR protein family HMM TIGR01575. | Conserved hypothetical protein; Similar to GP:17427197; identified by sequence similarity; putative. | 0.520 |
| AAO55183.1 | AAO55186.1 | PSPTO_1663 | PSPTO_1666 | Acetyltransferase, GNAT family; Identified by match to TIGR protein family HMM TIGR01575. | Transcriptional regulator, Crp/Fnr family. | 0.442 |
| AAO55183.1 | AAO55187.1 | PSPTO_1663 | PSPTO_1667 | Acetyltransferase, GNAT family; Identified by match to TIGR protein family HMM TIGR01575. | Universal stress protein family; See PMID:20190049 for expression data. | 0.565 |
| AAO55183.1 | hemN | PSPTO_1663 | PSPTO_1993 | Acetyltransferase, GNAT family; Identified by match to TIGR protein family HMM TIGR01575. | Oxygen-independent coproporphyrinogen III oxidase; See PMID:20190049 for expression data; similar to SP:P32131; identified by sequence similarity; putative; Belongs to the anaerobic coproporphyrinogen-III oxidase family. | 0.598 |
| AAO55183.1 | xfp | PSPTO_1663 | PSPTO_1670 | Acetyltransferase, GNAT family; Identified by match to TIGR protein family HMM TIGR01575. | Xylulose-5-phosphate/fructose-6-phosphate phosphoketolase; Similar to SP:Q9AEM9; identified by sequence similarity; putative. | 0.448 |
| AAO55184.1 | AAO55183.1 | PSPTO_1664 | PSPTO_1663 | Conserved hypothetical protein; Similar to GP:17427197; identified by sequence similarity; putative. | Acetyltransferase, GNAT family; Identified by match to TIGR protein family HMM TIGR01575. | 0.520 |
| AAO55184.1 | AAO55186.1 | PSPTO_1664 | PSPTO_1666 | Conserved hypothetical protein; Similar to GP:17427197; identified by sequence similarity; putative. | Transcriptional regulator, Crp/Fnr family. | 0.449 |
| AAO55186.1 | AAO55183.1 | PSPTO_1666 | PSPTO_1663 | Transcriptional regulator, Crp/Fnr family. | Acetyltransferase, GNAT family; Identified by match to TIGR protein family HMM TIGR01575. | 0.442 |
| AAO55186.1 | AAO55184.1 | PSPTO_1666 | PSPTO_1664 | Transcriptional regulator, Crp/Fnr family. | Conserved hypothetical protein; Similar to GP:17427197; identified by sequence similarity; putative. | 0.449 |
| AAO55186.1 | AAO55187.1 | PSPTO_1666 | PSPTO_1667 | Transcriptional regulator, Crp/Fnr family. | Universal stress protein family; See PMID:20190049 for expression data. | 0.566 |
| AAO55186.1 | hemN | PSPTO_1666 | PSPTO_1993 | Transcriptional regulator, Crp/Fnr family. | Oxygen-independent coproporphyrinogen III oxidase; See PMID:20190049 for expression data; similar to SP:P32131; identified by sequence similarity; putative; Belongs to the anaerobic coproporphyrinogen-III oxidase family. | 0.549 |
| AAO55187.1 | AAO54221.1 | PSPTO_1667 | PSPTO_0679 | Universal stress protein family; See PMID:20190049 for expression data. | Outer membrane protein OmpW; See PMID:20190049 for expression data. | 0.526 |
| AAO55187.1 | AAO55183.1 | PSPTO_1667 | PSPTO_1663 | Universal stress protein family; See PMID:20190049 for expression data. | Acetyltransferase, GNAT family; Identified by match to TIGR protein family HMM TIGR01575. | 0.565 |
| AAO55187.1 | AAO55186.1 | PSPTO_1667 | PSPTO_1666 | Universal stress protein family; See PMID:20190049 for expression data. | Transcriptional regulator, Crp/Fnr family. | 0.566 |
| AAO55187.1 | hemN | PSPTO_1667 | PSPTO_1993 | Universal stress protein family; See PMID:20190049 for expression data. | Oxygen-independent coproporphyrinogen III oxidase; See PMID:20190049 for expression data; similar to SP:P32131; identified by sequence similarity; putative; Belongs to the anaerobic coproporphyrinogen-III oxidase family. | 0.471 |
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