STRINGSTRING
bolA bolA AAO57617.1 AAO57617.1 AAO55252.1 AAO55252.1 AAO57891.1 AAO57891.1 yhgI yhgI AAO55250.1 AAO55250.1 csrA-2 csrA-2 fumC-1 fumC-1 AAO55254.1 AAO55254.1 AAO55255.1 AAO55255.1 AAO55256.1 AAO55256.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Experiments
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[Homology]
Score
bolAbolA protein; See PMID:20190049 for expression data; Belongs to the BolA/IbaG family. (95 aa)    
Predicted Functional Partners:
AAO57617.1
Identified by match to TIGR protein family HMM TIGR00365; see PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR00365; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 
 0.936
AAO55252.1
Conserved protein of unknown function; Similar to GP:5139534, and GP:5139534; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:5139534, and GP:5139534, identified by sequence similarity, putative.
  
    0.842
AAO57891.1
Toluene tolerance protein, putative; See PMID:20190049 for expression data; similar to GP:4336803; identified by sequence similarity; putative; Belongs to the BolA/IbaG family.
 
   
 0.637
yhgI
yhgI protein; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins.
   
 
 0.585
AAO55250.1
NAD(P)H dehydrogenase, quinone family; See PMID:20190049 for expression data; similar to GP:14523747; identified by sequence similarity; putative.
       0.529
csrA-2
Carbon storage regulator; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s).
   
  
 0.527
fumC-1
Fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
       0.524
AAO55254.1
Rhodanese-like domain protein; See PMID:20190049 for expression data; Belongs to the UPF0176 family.
       0.518
AAO55255.1
Conserved protein of unknown function; See PMID:20190049 for expression data; similar to GP:17427790; identified by sequence similarity; putative.
       0.518
AAO55256.1
ABC transporter, ATP-binding/permease protein; See PMID:20190049 for expression data.
       0.518
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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