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argR argR pyrH pyrH AAO55348.1 AAO55348.1 hisP hisP AAO56012.1 AAO56012.1 aruG aruG AAO55346.1 AAO55346.1 argD-1 argD-1 rpoD rpoD dapB dapB aruF aruF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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argRTranscriptional regulator ArgR; See PMID:20190049 for expression data; similar to GP:17149103; identified by sequence similarity; putative. (351 aa)    
Predicted Functional Partners:
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
      
 0.846
AAO55348.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
 
    0.699
hisP
Histidine ABC transporter, ATP-binding protein; See PMID:20190049 for expression data.
  
  
 0.670
AAO56012.1
Transcriptional regulator, AraC family.
  
 
 0.653
aruG
Arginine N-succinyltransferase, beta subunit; See PMID:20190049 for expression data; similar to SP:P80358, SP:Q02940, and PID:151433; identified by sequence similarity; putative.
 
  
 0.576
AAO55346.1
Arginine/ornithine ABC transporter, permease protein; See PMID:20190049 for expression data.
  
  
 0.561
argD-1
Acetylornithine delta-aminotransferase; Identified by match to TIGR protein family HMM TIGR01822; see PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01822; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
 
  
 0.560
rpoD
RNA polymerase sigma-70 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
   
 
 0.558
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate.
      
 0.557
aruF
Arginine N-succinyltransferase, alpha subunit; See PMID:20190049 for expression data; similar to GP:4106585, and SP:P80357; identified by sequence similarity; putative.
 
  
 0.554
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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