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AAO55410.1 AAO55410.1 pcD pcD soxA-1 soxA-1 AAO58735.1 AAO58735.1 AAO58736.1 AAO58736.1 gabT-3 gabT-3 AAO55407.1 AAO55407.1 AAO55439.1 AAO55439.1 AAO56027.1 AAO56027.1 soxA-2 soxA-2 AAO53800.1 AAO53800.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AAO55410.1Conserved hypothetical protein; Similar to GP:15157750; identified by sequence similarity; putative. (429 aa)    
Predicted Functional Partners:
pcD
Piperideine-6-carboxylate dehydrogenase; Similar to GP:15076316, and GP:11990463; identified by sequence similarity; putative; Belongs to the aldehyde dehydrogenase family.
 
  
 0.819
soxA-1
Sarcosine oxidase, alpha subunit; Similar to SP:Q46337; identified by sequence similarity; putative; Belongs to the GcvT family.
 
 
 0.781
AAO58735.1
Glutamine synthetase; See PMID:20190049 for expression data; Belongs to the glutamine synthetase family.
 
  
 0.646
AAO58736.1
Glutamine synthetase; See PMID:20190049 for expression data; Belongs to the glutamine synthetase family.
 
  
 0.604
gabT-3
4-aminobutyrate aminotransferase; Similar to SP:P22256; identified by sequence similarity; putative; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.603
AAO55407.1
Conserved hypothetical protein; Similar to GP:15979446, and GP:15979446; identified by sequence similarity; putative.
 
   
 0.558
AAO55439.1
Glutamine synthetase; Identified by match to TIGR protein family HMM TIGR00653; Belongs to the glutamine synthetase family.
 
  
 0.549
AAO56027.1
Pyridine nucleotide-disulfide oxidoreductase family protein; Similar to GP:14026612, and SP:P72300; identified by sequence similarity; putative.
 
 
 
 0.523
soxA-2
Sarcosine oxidase, alpha subunit; Similar to SP:Q46337; identified by sequence similarity; putative; Belongs to the GcvT family.
 
 
 0.508
AAO53800.1
Pyridine nucleotide-disulfide oxidoreductase family protein; Similar to GP:14026612, and SP:P72300; identified by sequence similarity; putative.
 
 
 
 0.479
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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