Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AAO55655.1 | AAO55656.1 | PSPTO_2138 | PSPTO_2139 | ABC transporter, periplasmic substrate-binding protein, putative; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01297. | Cation ABC transporter, permease protein; See PMID:20190049 for expression data. | 0.975 |
| AAO55655.1 | AAO55657.1 | PSPTO_2138 | PSPTO_2140 | ABC transporter, periplasmic substrate-binding protein, putative; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01297. | Cation ABC transporter, ATP-binding protein; See PMID:20190049 for expression data. | 0.979 |
| AAO55655.1 | AAO55658.1 | PSPTO_2138 | PSPTO_2141 | ABC transporter, periplasmic substrate-binding protein, putative; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01297. | Cation ABC transporter, periplasmic cation-binding protein; See PMID:20190049 for expression data; similar to SP:P31304; identified by sequence similarity; putative; Belongs to the bacterial solute-binding protein 9 family. | 0.960 |
| AAO55655.1 | AAO55659.1 | PSPTO_2138 | PSPTO_2142 | ABC transporter, periplasmic substrate-binding protein, putative; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01297. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | 0.854 |
| AAO55655.1 | AAO55660.1 | PSPTO_2138 | PSPTO_2143 | ABC transporter, periplasmic substrate-binding protein, putative; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01297. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | 0.976 |
| AAO55655.1 | AAO55661.1 | PSPTO_2138 | PSPTO_2144 | ABC transporter, periplasmic substrate-binding protein, putative; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01297. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | 0.865 |
| AAO55655.1 | AAO55662.1 | PSPTO_2138 | PSPTO_2145 | ABC transporter, periplasmic substrate-binding protein, putative; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01297. | Iron-regulated membrane protein, putative; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF03929. | 0.938 |
| AAO55655.1 | AAO55663.1 | PSPTO_2138 | PSPTO_2146 | ABC transporter, periplasmic substrate-binding protein, putative; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01297. | Pyoverdine biosynthesis regulatory gene, putative; Present adjacent to pyoverdine biosynthetic genes; similar to GP:1890776; identified by sequence similarity; putative; see PMID:20190049 for expression data; Present adjacent to pyoverdine biosynthetic genes, see PMID:20190049 for expression data; similar to GP:1890776, identified by sequence similarity, putative. | 0.407 |
| AAO55655.1 | ADD52993.1 | PSPTO_2138 | PSPTO_5638 | ABC transporter, periplasmic substrate-binding protein, putative; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01297. | Conserved protein of unknown function; PMID:20190049. | 0.468 |
| AAO55656.1 | AAO55655.1 | PSPTO_2139 | PSPTO_2138 | Cation ABC transporter, permease protein; See PMID:20190049 for expression data. | ABC transporter, periplasmic substrate-binding protein, putative; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01297. | 0.975 |
| AAO55656.1 | AAO55657.1 | PSPTO_2139 | PSPTO_2140 | Cation ABC transporter, permease protein; See PMID:20190049 for expression data. | Cation ABC transporter, ATP-binding protein; See PMID:20190049 for expression data. | 0.998 |
| AAO55656.1 | AAO55658.1 | PSPTO_2139 | PSPTO_2141 | Cation ABC transporter, permease protein; See PMID:20190049 for expression data. | Cation ABC transporter, periplasmic cation-binding protein; See PMID:20190049 for expression data; similar to SP:P31304; identified by sequence similarity; putative; Belongs to the bacterial solute-binding protein 9 family. | 0.997 |
| AAO55656.1 | AAO55659.1 | PSPTO_2139 | PSPTO_2142 | Cation ABC transporter, permease protein; See PMID:20190049 for expression data. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | 0.883 |
| AAO55656.1 | AAO55660.1 | PSPTO_2139 | PSPTO_2143 | Cation ABC transporter, permease protein; See PMID:20190049 for expression data. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | 0.941 |
| AAO55656.1 | AAO55661.1 | PSPTO_2139 | PSPTO_2144 | Cation ABC transporter, permease protein; See PMID:20190049 for expression data. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | 0.902 |
| AAO55656.1 | AAO55662.1 | PSPTO_2139 | PSPTO_2145 | Cation ABC transporter, permease protein; See PMID:20190049 for expression data. | Iron-regulated membrane protein, putative; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF03929. | 0.870 |
| AAO55656.1 | AAO55663.1 | PSPTO_2139 | PSPTO_2146 | Cation ABC transporter, permease protein; See PMID:20190049 for expression data. | Pyoverdine biosynthesis regulatory gene, putative; Present adjacent to pyoverdine biosynthetic genes; similar to GP:1890776; identified by sequence similarity; putative; see PMID:20190049 for expression data; Present adjacent to pyoverdine biosynthetic genes, see PMID:20190049 for expression data; similar to GP:1890776, identified by sequence similarity, putative. | 0.407 |
| AAO55656.1 | AAO56138.1 | PSPTO_2139 | PSPTO_2635 | Cation ABC transporter, permease protein; See PMID:20190049 for expression data. | Cation ABC transporter, periplasmic cation-binding protein; See PMID:20190049 for expression data; similar to GP:15160219; identified by sequence similarity; putative; Belongs to the bacterial solute-binding protein 9 family. | 0.879 |
| AAO55656.1 | ADD52993.1 | PSPTO_2139 | PSPTO_5638 | Cation ABC transporter, permease protein; See PMID:20190049 for expression data. | Conserved protein of unknown function; PMID:20190049. | 0.407 |
| AAO55657.1 | AAO55655.1 | PSPTO_2140 | PSPTO_2138 | Cation ABC transporter, ATP-binding protein; See PMID:20190049 for expression data. | ABC transporter, periplasmic substrate-binding protein, putative; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01297. | 0.979 |
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