STRINGSTRING
AAO55772.1 AAO55772.1 AAO55771.1 AAO55771.1 AAO55279.1 AAO55279.1 AAO55770.1 AAO55770.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAO55772.1DoxD-like family protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF04173. (144 aa)    
Predicted Functional Partners:
AAO55771.1
Transglycosylase, SLT family.
       0.568
AAO55279.1
Conserved hypothetical protein; Similar to SP:P07779, GB:X06452, and PID:38742; identified by sequence similarity; putative.
 
 
 0.435
AAO55770.1
Hydrolase, TatD family.
       0.423
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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