STRINGSTRING
allD allD AAO54289.1 AAO54289.1 AAO55871.1 AAO55871.1 AAO53938.1 AAO53938.1 AAO54975.1 AAO54975.1 AAO55673.1 AAO55673.1 AAO57790.1 AAO57790.1 gltA gltA glcB-1 glcB-1 glcB-2 glcB-2 AAO55869.1 AAO55869.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
allDUreidoglycolate dehydrogenase; See PMID:20190049 for expression data; similar to GP:9947184, and SP:P77555; identified by sequence similarity; putative; Belongs to the LDH2/MDH2 oxidoreductase family. (343 aa)    
Predicted Functional Partners:
AAO54289.1
Transporter, putative; Identified by match to PFAM protein family HMM PF01758.
   
    0.705
AAO55871.1
Protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
       0.679
AAO53938.1
Renal dipeptidase family protein.
  
    0.537
AAO54975.1
Conserved hypothetical protein; Identified by match to PFAM protein family HMM PF01244.
  
    0.537
AAO55673.1
Renal dipeptidase family protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02776.
  
    0.537
AAO57790.1
Fumarate hydratase, class I, putative; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
 0.534
gltA
Citrate synthase I; Similar to PIR:A33596; identified by sequence similarity; putative; Belongs to the citrate synthase family.
   
 
 0.516
glcB-1
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
     
  0.499
glcB-2
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
     
  0.499
AAO55869.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
       0.486
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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