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amt-2 amt-2 glnK glnK gltB gltB AAO58227.1 AAO58227.1 thiG thiG thiC thiC AAO56091.1 AAO56091.1 ntrB ntrB AAO58442.1 AAO58442.1 AAO55257.1 AAO55257.1 ureAB ureAB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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amt-2Ammonium transporter; Identified by match to PFAM protein family HMM PF00909. (441 aa)    
Predicted Functional Partners:
glnK
Nitrogen regulatory protein P-II; Similar to GP:2735324; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:2735324, identified by sequence similarity, putative; Belongs to the P(II) protein family.
 
 0.994
gltB
Glutamate synthase, large subunit; See PMID:20190049 for expression data.
 
  
 0.832
AAO58227.1
Phosphomethylpyrimidine kinase, putative.
    
 
 0.743
thiG
Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
      
 0.737
thiC
Thiamin biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction.
      
 0.735
AAO56091.1
Hypothetical protein; Identified by Glimmer2; putative.
       0.645
ntrB
Nitrogen regulation protein NtrB.
  
 
 0.622
AAO58442.1
Response regulator/sensory box/GGDEF domain/EAL domain protein; See PMID:20190049 for expression data.
 
 
 0.572
AAO55257.1
Sensory box/GGDEF domain/EAL domain protein; See PMID:20190049 for expression data.
    
 0.568
ureAB
Urease, beta/gamma subunit; Similar to GP:14599161; identified by sequence similarity; putative; In the N-terminal section; belongs to the urease gamma subunit family.
  
  
 0.540
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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