STRINGSTRING
xylB xylB xylA xylA rpe rpe uxuB uxuB AAO56203.1 AAO56203.1 tal tal AAO54207.1 AAO54207.1 xylR xylR AAO54488.1 AAO54488.1 AAO54490.1 AAO54490.1 AAO57169.1 AAO57169.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
xylBXylulokinase; Identified by match to PFAM protein family HMM PF02782; see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02782. (493 aa)    
Predicted Functional Partners:
xylA
Xylose isomerase; Similar to GP:43314; identified by sequence similarity; putative; Belongs to the xylose isomerase family.
 
 
 0.997
rpe
Ribulose-phosphate 3-epimerase; See PMID:20190049 for expression data; Belongs to the ribulose-phosphate 3-epimerase family.
 
  
 0.946
uxuB
D-mannonate oxidoreductase; Similar to SP:P39160; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to SP:P39160, identified by sequence similarity, putative; Belongs to the mannitol dehydrogenase family.
 
   
 0.885
AAO56203.1
Fructokinase; Similar to GP:2293420; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:2293420, identified by sequence similarity, putative.
 
  
 0.814
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
  
 
 0.609
AAO54207.1
ROK family protein; Identified by match to PFAM protein family HMM PF00480.
 
  
 0.582
xylR
Xylose operon regluatory protein; Similar to SP:P37390, GB:M28880, GB:X16609, GB:X16609, SP:P16157, GB:S82671, PID:1845219, PID:747710, GB:M28880, GB:X16609, GB:X16609, SP:P16157, GB:S82671, PID:1845219, and PID:747710; identified by sequence similarity; putative.
 
 
 
 0.581
AAO54488.1
Phosphoenolpyruvate-protein phosphotransferase,EI/HPr/EIIA components; See PMID:20190049 for expression data; Belongs to the PEP-utilizing enzyme family.
   
 
 0.575
AAO54490.1
Phosphotransferase system, fructose-specific IIBC component; See PMID:20190049 for expression data.
     
 0.548
AAO57169.1
Oxidoreductase, aldo/keto reductase family; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01293.
 
  
 0.534
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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