STRINGSTRING
uxuB uxuB AAO56203.1 AAO56203.1 xylA xylA AAO54490.1 AAO54490.1 AAO54488.1 AAO54488.1 xylB xylB algD algD AAO56208.1 AAO56208.1 AAO53908.1 AAO53908.1 AAO55696.1 AAO55696.1 AAO56206.1 AAO56206.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
uxuBD-mannonate oxidoreductase; Similar to SP:P39160; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to SP:P39160, identified by sequence similarity, putative; Belongs to the mannitol dehydrogenase family. (493 aa)    
Predicted Functional Partners:
AAO56203.1
Fructokinase; Similar to GP:2293420; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:2293420, identified by sequence similarity, putative.
 
  
 0.982
xylA
Xylose isomerase; Similar to GP:43314; identified by sequence similarity; putative; Belongs to the xylose isomerase family.
 
  
 0.947
AAO54490.1
Phosphotransferase system, fructose-specific IIBC component; See PMID:20190049 for expression data.
  
 
 0.946
AAO54488.1
Phosphoenolpyruvate-protein phosphotransferase,EI/HPr/EIIA components; See PMID:20190049 for expression data; Belongs to the PEP-utilizing enzyme family.
  
  
 0.932
xylB
Xylulokinase; Identified by match to PFAM protein family HMM PF02782; see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02782.
 
   
 0.885
algD
GDP-mannose 6-dehydrogenase AlgD; Catalyzes the oxidation of guanosine diphospho-D-mannose (GDP-D-mannose) to GDP-D-mannuronic acid, a precursor for alginate polymerization. The alginate layer causes a mucoid phenotype and provides a protective barrier against host immune defenses and antibiotics (By similarity); Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
     
 0.851
AAO56208.1
Mannitol ABC transporter, periplasmic mannitol-binding protein; Similar to GP:2293414; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:2293414, identified by sequence similarity, putative.
 
   
 0.750
AAO53908.1
Sugar ABC transporter, periplasmic sugar-binding protein, putative; Similar to GP:2293414, GB:M77351, SP:P27756, and PID:153736; identified by sequence similarity; putative.
 
   
 0.748
AAO55696.1
Mandelate racemase/muconate lactonizing enzyme family protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02746.
 
  
 0.685
AAO56206.1
Mannitol ABC transporter, permease protein; See PMID:20190049 for expression data.
 
  
 0.683
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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