STRINGSTRING
AAO56384.1 AAO56384.1 AAO59001.1 AAO59001.1 AAO54220.1 AAO54220.1 galU galU galE galE AAO59000.1 AAO59000.1 AAO56383.1 AAO56383.1 AAO56382.1 AAO56382.1 AAO56915.1 AAO56915.1 AAO54599.1 AAO54599.1 glf glf
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
AAO56384.1UDP-glucose 6-dehydrogenase; Similar to SP:O54068; identified by sequence similarity; putative. (464 aa)    
Predicted Functional Partners:
AAO59001.1
Capsular polysaccharide biosynthesis protein; Similar to SP:P39858, GB:J04970, SP:P14384, and PID:179932; identified by sequence similarity; putative.
 
 0.976
AAO54220.1
NAD-dependent epimerase/dehydratase family protein; See PMID:20190049 for expression data.
 
 0.948
galU
UTP-glucose-1-phosphate uridylyltransferase; See PMID:20190049 for expression data.
  
 0.945
galE
UDP-glucose 4-epimerase; Identified by match to TIGR protein family HMM TIGR01777; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
 
 0.927
AAO59000.1
UDP-glucose 6-dehydrogenase; Similar to SP:O54068; identified by sequence similarity; putative.
  
  
 
0.903
AAO56383.1
Hypothetical protein; Similar to SP:Q9HY59; identified by sequence similarity; putative.
  
  
 0.843
AAO56382.1
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
AAO56915.1
Polysaccharide biosynthesis protein, putative; Identified by match to PFAM protein family HMM PF03023.
  
  
 0.666
AAO54599.1
Lipopolysaccharide biosynthesis protein; Similar to GP:2558982, and GP:14090396; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:2558982, and GP:14090396, identified by sequence similarity, putative.
  
  
 0.638
glf
UDP-galactopyranose mutase; Identified by match to PFAM protein family HMM PF03275.
  
  
 0.636
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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