STRINGSTRING
medH medH estB estB rhtC rhtC adhC adhC glgA glgA AAO55699.1 AAO55699.1 AAO56199.1 AAO56199.1 fadB fadB AAO54714.1 AAO54714.1 AAO56641.1 AAO56641.1 cfa6 cfa6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
medHMethanol dehydrogenase, NAD-dependent; Similar to GP:15157277, and SP:P31005; identified by sequence similarity; putative. (384 aa)    
Predicted Functional Partners:
estB
Esterase; Similar to GP:7327686, and GP:7327686; identified by sequence similarity; putative.
       0.689
rhtC
Threonine efflux protein; Similar to GP:6960243, and SP:P27846; identified by sequence similarity; putative.
  
    0.662
adhC
Alcohol dehydrogenase, class III; See PMID:20190049 for expression data.
    
 
 0.654
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
  
 0.594
AAO55699.1
Oxidoreductase, zinc-binding protein; Identified by match to PFAM protein family HMM PF02826.
  
 
 0.592
AAO56199.1
Oxidoreductase, zinc-binding protein; See PMID:20190049 for expression data; similar to SP:P31975; identified by sequence similarity; putative.
  
 
 0.592
fadB
Fatty oxidation complex, alpha subunit; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
  
 
 0.567
AAO54714.1
Oxidoreductase, short chain dehydrogenase/reductase family; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01831; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.497
AAO56641.1
Pyruvate ferredoxin/flavodoxin oxidoreductase family protein; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01816.
  
  
 0.459
cfa6
Coronafacic acid polyketide synthase I; This gene is the first of two multimodular polyketide synthetases involved in the biosynthesis of coronafacic acid. This synthetase is proposed to receive CPC (2-carboxy-2-cyclopentenone) from an acyl carrier protein (cfa1), it then adds a buyrate group and then completely reduces the ketone of the (former) carboxylate group. The resulting product is then passed to the second polyketide synthetase (cfa7); similar to GP:13346874; identified by sequence similarity; putative; see PMID:20190049 for expression data; This gene is the first of two multi [...]
   
 
 0.455
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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