STRINGSTRING
AAO56590.1 AAO56590.1 AAO56591.1 AAO56591.1 AAO55041.1 AAO55041.1 AAO58275.1 AAO58275.1 AAO57850.1 AAO57850.1 AAO55063.1 AAO55063.1 mucA mucA AAO57261.1 AAO57261.1 AAO55163.1 AAO55163.1 AAO58417.1 AAO58417.1 AAO58437.1 AAO58437.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAO56590.1Transcriptional regulator, putative; Similar to GP:1184831; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:1184831, identified by sequence similarity, putative. (120 aa)    
Predicted Functional Partners:
AAO56591.1
Protein of unknown function; Identified by Glimmer2; putative; see PMID:20190049 for expression data; identified by Glimmer.
       0.773
AAO55041.1
Conserved protein of unknown function; See PMID:20190049 for expression data.
  
     0.742
AAO58275.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
     0.700
AAO57850.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
     0.699
AAO55063.1
Outer membrane protein OmpH, putative; See PMID:20190049 for expression data.
  
     0.687
mucA
Sigma factor algU negative regulatory protein MucA; See PMID:20190049 for expression data; similar to SP:P38107; identified by sequence similarity; putative.
  
     0.619
AAO57261.1
Serine/threonine protein phosphatase; See PMID:20190049 for expression data; similar to GP:15020692; identified by sequence similarity; putative.
  
     0.617
AAO55163.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF03695; Belongs to the UPF0149 family.
  
     0.609
AAO58417.1
Conserved hypothetical protein; Identified by match to PFAM protein family HMM PF02585.
  
     0.606
AAO58437.1
Membrane protein, TIGR01666; Identified by match to PFAM protein family HMM PF04148.
  
     0.605
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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