STRINGSTRING
ahpF ahpF ahpC ahpC AAO58743.1 AAO58743.1 sodB sodB sodC sodC sodA sodA AAO57442.1 AAO57442.1 katB katB ohr ohr fur fur fur-2 fur-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
ahpFAlkyl hydroperoxide reductase, subunit F; See PMID:20190049 for expression data; similar to SP:P35340; identified by sequence similarity; putative. (520 aa)    
Predicted Functional Partners:
ahpC
Alkyl hydroperoxide reductase, subunit C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
 
  
 0.986
AAO58743.1
Antioxidant, AhpC/Tsa family; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00578.
  
  
 0.764
sodB
Superoxide dismutase, Fe; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
  
 0.650
sodC
Superoxide dismutase, Cu-Zn; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
      
 0.613
sodA
Superoxide dismutase, Mn; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
  
 0.613
AAO57442.1
Dps family protein; Similar to SP:P37960; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to SP:P37960, identified by sequence similarity, putative; Belongs to the Dps family.
 
  
 0.610
katB
Catalase; Similar to SP:P46206, GB:M11958, GB:M11959, GB:M11960, GB:M11961, GB:M11962, GB:M11963, GB:M11964, GB:M11965, GB:M11966, GB:M11967, GB:M11968, GB:L00159, GB:L00160, GB:S75476, GB:V00572, GB:D28371, SP:P00558, SP:P07205, PID:35435, PID:387020, and PID:387021; identified by sequence similarity; putative; Belongs to the catalase family.
  
  
 0.608
ohr
Organic hydroperoxide resistance protein.
      
 0.539
fur
Ferric uptake regulation protein; See PMID:20190049 for expression data; Belongs to the Fur family.
     
 0.526
fur-2
Zinc uptake regulation protein, putative; See PMID:20190049 for expression data; Belongs to the Fur family.
     
 0.526
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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