STRINGSTRING
ahpC ahpC ahpF ahpF trxB trxB fur fur soxA-2 soxA-2 katE katE tpx tpx AAO55279.1 AAO55279.1 AAO55208.1 AAO55208.1 dsbE dsbE sodB sodB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ahpCAlkyl hydroperoxide reductase, subunit C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. (187 aa)    
Predicted Functional Partners:
ahpF
Alkyl hydroperoxide reductase, subunit F; See PMID:20190049 for expression data; similar to SP:P35340; identified by sequence similarity; putative.
 
  
 0.986
trxB
Thioredoxin reductase; Identified by match to TIGR protein family HMM TIGR01812; see PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01812.
  
 
 0.870
fur
Ferric uptake regulation protein; See PMID:20190049 for expression data; Belongs to the Fur family.
  
  
 0.843
soxA-2
Sarcosine oxidase, alpha subunit; Similar to SP:Q46337; identified by sequence similarity; putative; Belongs to the GcvT family.
  
 
 0.782
katE
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 
 0.739
tpx
Thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily.
  
  
 0.711
AAO55279.1
Conserved hypothetical protein; Similar to SP:P07779, GB:X06452, and PID:38742; identified by sequence similarity; putative.
  
 0.679
AAO55208.1
Thioredoxin, putative; See PMID:20190049 for expression data.
  
 0.678
dsbE
Thiol:disulfide interchange protein DsbE.
  
 0.678
sodB
Superoxide dismutase, Fe; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
  
 0.659
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
Server load: low (28%) [HD]