STRINGSTRING
AAO56650.1 AAO56650.1 AAO58008.1 AAO58008.1 AAO56651.1 AAO56651.1 phbA-2 phbA-2 AAO54063.1 AAO54063.1 AAO57291.1 AAO57291.1 AAO57931.1 AAO57931.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAO56650.1Lipoprotein, putative; Similar to GP:13937482; identified by sequence similarity; putative. (159 aa)    
Predicted Functional Partners:
AAO58008.1
Outer membrane porin, OprD family; Similar to GP:9950741, and SP:P32722; identified by sequence similarity; putative.
  
     0.605
AAO56651.1
Conserved domain protein; Similar to SP:P37691, PID:912478, GB:U00096, and PID:1790043; identified by sequence similarity; putative.
       0.545
phbA-2
acetyl-CoA acetyltransferase; See PMID:20190049 for expression data; similar to SP:P45359; identified by sequence similarity; putative; Belongs to the thiolase-like superfamily. Thiolase family.
  
    0.523
AAO54063.1
Membrane protein, putative; See PMID:20190049 for expression data; similar to GP:17430601; identified by sequence similarity; putative.
  
     0.499
AAO57291.1
Membrane protein, putative; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR00948.
  
     0.485
AAO57931.1
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.448
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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