STRINGSTRING
AAO56664.1 AAO56664.1 AAO56663.1 AAO56663.1 AAO55845.1 AAO55845.1 AAO56659.1 AAO56659.1 AAO57579.1 AAO57579.1 AAO55846.1 AAO55846.1 AAO56317.1 AAO56317.1 AAO56665.1 AAO56665.1 AAO58104.1 AAO58104.1 AAO58341.1 AAO58341.1 AAO58387.1 AAO58387.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAO56664.1Lipoprotein, putative; See PMID:20190049 for expression data. (207 aa)    
Predicted Functional Partners:
AAO56663.1
PqiB family protein; See PMID:20190049 for expression data.
 
   
 0.953
AAO55845.1
Conserved protein of unknown function; See PMID:20190049 for expression data.
  
     0.444
AAO56659.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
     0.442
AAO57579.1
Purine nucleoside permease, putative; Similar to GP:3764057, and GP:3764057; identified by sequence similarity; putative.
  
     0.442
AAO55846.1
Conserved protein of unknown function; See PMID:20190049 for expression data.
  
     0.440
AAO56317.1
Fatty acid desaturase; Identified by match to PFAM protein family HMM PF01569.
  
     0.423
AAO56665.1
Transcriptional regulator, putative; Identified by match to PFAM protein family HMM PF01381.
       0.423
AAO58104.1
Conserved domain protein; See PMID:20190049 for expression data; similar to GP:17428415; identified by sequence similarity; putative.
  
     0.407
AAO58341.1
Conserved protein of unknown function; See PMID:20190049 for expression data.
  
     0.406
AAO58387.1
Lipoprotein, putative; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF03886.
  
     0.401
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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