Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AAO56699.1 | AAO56700.1 | PSPTO_3219 | PSPTO_3220 | Hypothetical protein; Identified by Glimmer2; putative. | ISPsy5, transposase. | 0.535 |
AAO56699.1 | AAO56701.1 | PSPTO_3219 | PSPTO_3221 | Hypothetical protein; Identified by Glimmer2; putative. | ISPsy5, Orf1; The gene assignment is based on its position in a multicopy insertion sequence, directly adjacent to an ORF matching an HMM for the IS66 family; similar to GP:8037784; identified by sequence similarity; putative. | 0.506 |
AAO56700.1 | AAO56699.1 | PSPTO_3220 | PSPTO_3219 | ISPsy5, transposase. | Hypothetical protein; Identified by Glimmer2; putative. | 0.535 |
AAO56700.1 | AAO56701.1 | PSPTO_3220 | PSPTO_3221 | ISPsy5, transposase. | ISPsy5, Orf1; The gene assignment is based on its position in a multicopy insertion sequence, directly adjacent to an ORF matching an HMM for the IS66 family; similar to GP:8037784; identified by sequence similarity; putative. | 0.727 |
AAO56700.1 | AAO56702.1 | PSPTO_3220 | PSPTO_3222 | ISPsy5, transposase. | Hypothetical protein; Identified by Glimmer2; putative. | 0.544 |
AAO56701.1 | AAO56699.1 | PSPTO_3221 | PSPTO_3219 | ISPsy5, Orf1; The gene assignment is based on its position in a multicopy insertion sequence, directly adjacent to an ORF matching an HMM for the IS66 family; similar to GP:8037784; identified by sequence similarity; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.506 |
AAO56701.1 | AAO56700.1 | PSPTO_3221 | PSPTO_3220 | ISPsy5, Orf1; The gene assignment is based on its position in a multicopy insertion sequence, directly adjacent to an ORF matching an HMM for the IS66 family; similar to GP:8037784; identified by sequence similarity; putative. | ISPsy5, transposase. | 0.727 |
AAO56701.1 | AAO56702.1 | PSPTO_3221 | PSPTO_3222 | ISPsy5, Orf1; The gene assignment is based on its position in a multicopy insertion sequence, directly adjacent to an ORF matching an HMM for the IS66 family; similar to GP:8037784; identified by sequence similarity; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.576 |
AAO56702.1 | AAO56700.1 | PSPTO_3222 | PSPTO_3220 | Hypothetical protein; Identified by Glimmer2; putative. | ISPsy5, transposase. | 0.544 |
AAO56702.1 | AAO56701.1 | PSPTO_3222 | PSPTO_3221 | Hypothetical protein; Identified by Glimmer2; putative. | ISPsy5, Orf1; The gene assignment is based on its position in a multicopy insertion sequence, directly adjacent to an ORF matching an HMM for the IS66 family; similar to GP:8037784; identified by sequence similarity; putative. | 0.576 |