STRINGSTRING
AAO56751.1 AAO56751.1 AAO56750.1 AAO56750.1 AAO54364.1 AAO54364.1 AAO56309.1 AAO56309.1 AAO56313.1 AAO56313.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AAO56751.1Conserved protein of unknown function; See PMID:20190049 for expression data; similar to GP:17427756; identified by sequence similarity; putative. (166 aa)    
Predicted Functional Partners:
AAO56750.1
Conserved hypothetical protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.
       0.568
AAO54364.1
Transcriptional regulator, TetR family; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00440.
  
     0.436
AAO56309.1
Conserved hypothetical protein; Similar to GP:15140142; identified by sequence similarity; putative.
  
     0.406
AAO56313.1
Peptide ABC transporter, periplasmic peptide-binding protein; Similar to GP:15140494, and SP:P23847; identified by sequence similarity; putative.
  
     0.401
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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