STRINGSTRING
AAO56772.1 AAO56772.1 AAO55672.1 AAO55672.1 AAO56949.1 AAO56949.1 plcA1 plcA1 AAO58947.1 AAO58947.1 opgD opgD tonB-1 tonB-1 AAO54809.1 AAO54809.1 AAO55869.1 AAO55869.1 tonB-2 tonB-2 AAO53817.1 AAO53817.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAO56772.1TonB-dependent siderophore receptor, putative; See PMID:20190049 for expression data; similar to GP:2981048, and SP:P00089; identified by sequence similarity; putative. (711 aa)    
Predicted Functional Partners:
AAO55672.1
Aminotransferase, class V; See PMID:20190049 for expression data; similar to GP:13506638; identified by sequence similarity; putative.
      
 0.846
AAO56949.1
Potassium efflux system protein PhaE, putative; Similar to GP:3128271; identified by sequence similarity; putative.
      
 0.846
plcA1
Acid phosphatase; Similar to GP:7650483, and GP:8572766; identified by sequence similarity; putative.
      
 0.842
AAO58947.1
N-acetylmuramoyl-L-alanine amidase, family 3; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01520.
      
 0.842
opgD
Periplasmic glucan biosynthesis protein, putative; Probably involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans (OPGs); Belongs to the OpgD/OpgG family.
      
 0.842
tonB-1
tonB protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.715
AAO54809.1
Regulatory protein, putative.
 
  
 0.697
AAO55869.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
 
  
 0.678
tonB-2
tonB protein; Identified by match to PFAM protein family HMM PF03544.
 
 
 0.664
AAO53817.1
tonB protein, putative; Similar to SP:O34261; identified by sequence similarity; putative.
 
 
 0.654
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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