STRINGSTRING
aceA aceA glcB-1 glcB-1 glcB-2 glcB-2 acnA acnA acnB acnB AAO53804.1 AAO53804.1 AAO54742.1 AAO54742.1 eda-1 eda-1 glcD glcD glcE glcE allA allA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
aceAIsocitrate lyase. (441 aa)    
Predicted Functional Partners:
glcB-1
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
 
 
 0.981
glcB-2
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
 
 
 0.981
acnA
Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
   
 
 0.920
acnB
Aconitate hydratase 2; Identified by match to TIGR protein family HMM TIGR01342; see PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01342; Belongs to the aconitase/IPM isomerase family.
     
 0.916
AAO53804.1
D-isomer specific 2-hydroxyacid dehydrogenase family protein; Similar to GP:14524160, and GP:13360870; identified by sequence similarity; putative.
   
 
 0.909
AAO54742.1
D-isomer specific 2-hydroxyacid dehydrogenase family protein.
     
 0.907
eda-1
4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxyphosphogluconate; See PMID:20190049 for expression data.
     
 0.906
glcD
Glycolate oxidase, subunit GlcD; Similar to SP:P52075, SP:P32718, PID:396419, GB:U00096, and PID:1790522; identified by sequence similarity; putative.
     
 0.905
glcE
Glycolate oxidase, subunit GlcE.
     
 0.905
allA
Ureidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source.
     
 0.806
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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