Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AAO54599.1 | AAO56915.1 | PSPTO_1070 | PSPTO_3440 | Lipopolysaccharide biosynthesis protein; Similar to GP:2558982, and GP:14090396; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:2558982, and GP:14090396, identified by sequence similarity, putative. | Polysaccharide biosynthesis protein, putative; Identified by match to PFAM protein family HMM PF03023. | 0.872 |
| AAO54599.1 | AAO56918.1 | PSPTO_1070 | PSPTO_3443 | Lipopolysaccharide biosynthesis protein; Similar to GP:2558982, and GP:14090396; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:2558982, and GP:14090396, identified by sequence similarity, putative. | Tyrosine-protein kinase; Similar to GP:4512007, and SP:P38134; identified by sequence similarity; putative. | 0.729 |
| AAO54599.1 | AAO56921.1 | PSPTO_1070 | PSPTO_3446 | Lipopolysaccharide biosynthesis protein; Similar to GP:2558982, and GP:14090396; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:2558982, and GP:14090396, identified by sequence similarity, putative. | Glycosyl transferase, group 1 family protein. | 0.562 |
| AAO54599.1 | AAO56922.1 | PSPTO_1070 | PSPTO_3447 | Lipopolysaccharide biosynthesis protein; Similar to GP:2558982, and GP:14090396; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:2558982, and GP:14090396, identified by sequence similarity, putative. | Glycosyl transferase, group 1 family protein. | 0.484 |
| AAO54599.1 | AAO56923.1 | PSPTO_1070 | PSPTO_3448 | Lipopolysaccharide biosynthesis protein; Similar to GP:2558982, and GP:14090396; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:2558982, and GP:14090396, identified by sequence similarity, putative. | Glycosyl transferase, group 1 family protein; Similar to GP:15160113; identified by sequence similarity; putative. | 0.484 |
| AAO54599.1 | AAO56924.1 | PSPTO_1070 | PSPTO_3449 | Lipopolysaccharide biosynthesis protein; Similar to GP:2558982, and GP:14090396; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:2558982, and GP:14090396, identified by sequence similarity, putative. | Capsular polysaccharide biosynthesis protein; Similar to SP:Q48460; identified by sequence similarity; putative. | 0.914 |
| AAO54599.1 | AAO57004.1 | PSPTO_1070 | PSPTO_3529 | Lipopolysaccharide biosynthesis protein; Similar to GP:2558982, and GP:14090396; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:2558982, and GP:14090396, identified by sequence similarity, putative. | Capsular polysaccharide biosynthesis protein PslA; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02719. | 0.719 |
| AAO54599.1 | algD | PSPTO_1070 | PSPTO_1243 | Lipopolysaccharide biosynthesis protein; Similar to GP:2558982, and GP:14090396; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:2558982, and GP:14090396, identified by sequence similarity, putative. | GDP-mannose 6-dehydrogenase AlgD; Catalyzes the oxidation of guanosine diphospho-D-mannose (GDP-D-mannose) to GDP-D-mannuronic acid, a precursor for alginate polymerization. The alginate layer causes a mucoid phenotype and provides a protective barrier against host immune defenses and antibiotics (By similarity); Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. | 0.699 |
| AAO56915.1 | AAO54599.1 | PSPTO_3440 | PSPTO_1070 | Polysaccharide biosynthesis protein, putative; Identified by match to PFAM protein family HMM PF03023. | Lipopolysaccharide biosynthesis protein; Similar to GP:2558982, and GP:14090396; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:2558982, and GP:14090396, identified by sequence similarity, putative. | 0.872 |
| AAO56915.1 | AAO56918.1 | PSPTO_3440 | PSPTO_3443 | Polysaccharide biosynthesis protein, putative; Identified by match to PFAM protein family HMM PF03023. | Tyrosine-protein kinase; Similar to GP:4512007, and SP:P38134; identified by sequence similarity; putative. | 0.921 |
| AAO56915.1 | AAO56920.1 | PSPTO_3440 | PSPTO_3445 | Polysaccharide biosynthesis protein, putative; Identified by match to PFAM protein family HMM PF03023. | Glycosyl transferase, group 2 family protein; Identified by match to TIGR protein family HMM TIGR01556. | 0.537 |
| AAO56915.1 | AAO56921.1 | PSPTO_3440 | PSPTO_3446 | Polysaccharide biosynthesis protein, putative; Identified by match to PFAM protein family HMM PF03023. | Glycosyl transferase, group 1 family protein. | 0.623 |
| AAO56915.1 | AAO56922.1 | PSPTO_3440 | PSPTO_3447 | Polysaccharide biosynthesis protein, putative; Identified by match to PFAM protein family HMM PF03023. | Glycosyl transferase, group 1 family protein. | 0.583 |
| AAO56915.1 | AAO56923.1 | PSPTO_3440 | PSPTO_3448 | Polysaccharide biosynthesis protein, putative; Identified by match to PFAM protein family HMM PF03023. | Glycosyl transferase, group 1 family protein; Similar to GP:15160113; identified by sequence similarity; putative. | 0.527 |
| AAO56915.1 | AAO56924.1 | PSPTO_3440 | PSPTO_3449 | Polysaccharide biosynthesis protein, putative; Identified by match to PFAM protein family HMM PF03023. | Capsular polysaccharide biosynthesis protein; Similar to SP:Q48460; identified by sequence similarity; putative. | 0.907 |
| AAO56915.1 | AAO57004.1 | PSPTO_3440 | PSPTO_3529 | Polysaccharide biosynthesis protein, putative; Identified by match to PFAM protein family HMM PF03023. | Capsular polysaccharide biosynthesis protein PslA; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02719. | 0.563 |
| AAO56915.1 | algD | PSPTO_3440 | PSPTO_1243 | Polysaccharide biosynthesis protein, putative; Identified by match to PFAM protein family HMM PF03023. | GDP-mannose 6-dehydrogenase AlgD; Catalyzes the oxidation of guanosine diphospho-D-mannose (GDP-D-mannose) to GDP-D-mannuronic acid, a precursor for alginate polymerization. The alginate layer causes a mucoid phenotype and provides a protective barrier against host immune defenses and antibiotics (By similarity); Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. | 0.666 |
| AAO56915.1 | rfaH | PSPTO_3440 | PSPTO_3444 | Polysaccharide biosynthesis protein, putative; Identified by match to PFAM protein family HMM PF03023. | Transcriptional activator RfaH; Enhances distal genes transcription elongation in a specialized subset of operons that encode extracytoplasmic components. Belongs to the RfaH family. | 0.654 |
| AAO56918.1 | AAO54599.1 | PSPTO_3443 | PSPTO_1070 | Tyrosine-protein kinase; Similar to GP:4512007, and SP:P38134; identified by sequence similarity; putative. | Lipopolysaccharide biosynthesis protein; Similar to GP:2558982, and GP:14090396; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:2558982, and GP:14090396, identified by sequence similarity, putative. | 0.729 |
| AAO56918.1 | AAO56915.1 | PSPTO_3443 | PSPTO_3440 | Tyrosine-protein kinase; Similar to GP:4512007, and SP:P38134; identified by sequence similarity; putative. | Polysaccharide biosynthesis protein, putative; Identified by match to PFAM protein family HMM PF03023. | 0.921 |
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