STRINGSTRING
glcG glcG glcE glcE glcB-2 glcB-2 glcD glcD AAO56305.1 AAO56305.1 AAO54367.1 AAO54367.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
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[Homology]
Score
glcGglcG protein. (135 aa)    
Predicted Functional Partners:
glcE
Glycolate oxidase, subunit GlcE.
 
  
 0.799
glcB-2
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
  
  
 0.734
glcD
Glycolate oxidase, subunit GlcD; Similar to SP:P52075, SP:P32718, PID:396419, GB:U00096, and PID:1790522; identified by sequence similarity; putative.
 
  
 0.704
AAO56305.1
Oxidoreductase, FAD-binding, putative; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02913.
  
  
 0.510
AAO54367.1
Conserved protein of unknown function; See PMID:20190049 for expression data; similar to GP:5924036, and GP:5924036; identified by sequence similarity; putative.
 
     0.502
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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