STRINGSTRING
katB katB katG katG katE katE glcD glcD glcE glcE sodC sodC AAO57057.1 AAO57057.1 sodB sodB sodA sodA AAO54714.1 AAO54714.1 ahpF ahpF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
katBCatalase; Similar to SP:P46206, GB:M11958, GB:M11959, GB:M11960, GB:M11961, GB:M11962, GB:M11963, GB:M11964, GB:M11965, GB:M11966, GB:M11967, GB:M11968, GB:L00159, GB:L00160, GB:S75476, GB:V00572, GB:D28371, SP:P00558, SP:P07205, PID:35435, PID:387020, and PID:387021; identified by sequence similarity; putative; Belongs to the catalase family. (510 aa)    
Predicted Functional Partners:
katG
Catalase/peroxidase HPI; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
    
 0.966
katE
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
0.919
glcD
Glycolate oxidase, subunit GlcD; Similar to SP:P52075, SP:P32718, PID:396419, GB:U00096, and PID:1790522; identified by sequence similarity; putative.
   
 0.912
glcE
Glycolate oxidase, subunit GlcE.
   
 0.912
sodC
Superoxide dismutase, Cu-Zn; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
 
 0.810
AAO57057.1
Ankyrin domain protein; Similar to GB:U09062, SP:P01762, PID:483866, PID:520409, PID:520410, PID:547523, PID:553456, PID:553461, PID:553463, PID:567113, PID:567114, PID:567115, and PID:976315; identified by sequence similarity; putative.
 
 
 0.746
sodB
Superoxide dismutase, Fe; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 0.732
sodA
Superoxide dismutase, Mn; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 0.695
AAO54714.1
Oxidoreductase, short chain dehydrogenase/reductase family; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01831; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.627
ahpF
Alkyl hydroperoxide reductase, subunit F; See PMID:20190049 for expression data; similar to SP:P35340; identified by sequence similarity; putative.
  
  
 0.608
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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